Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLCNKAP51800 AC099654.2-201ENST00000433031 1980 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 PHKBP1-201ENST00000450951 1951 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCNKAP51800 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCNKAP51800 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLCNKAP51800 MED23-203ENST00000368058 4576 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCNKAP51800 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCNKAP51800 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.85□□□□□ -1.63
CLCNKAP51800 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.85□□□□□ -1.63
CLCNKAP51800 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLCNKAP51800 RNU6-207P-201ENST00000384137 107 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 RNU6-225P-201ENST00000384613 103 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AC093719.1-202ENST00000392735 373 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 RN7SKP16-201ENST00000410180 299 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 RN7SKP247-201ENST00000411094 308 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AL139128.1-201ENST00000413921 941 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 GTF2IP5-201ENST00000414608 731 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC072062.1-204ENST00000437897 1132 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC006466.1-201ENST00000438721 289 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCNKAP51800 SLC25A18P1-201ENST00000449385 454 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 OR52J1P-201ENST00000450596 932 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 CALM1P2-201ENST00000452941 448 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 RPS17P11-201ENST00000474297 293 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC025459.1-201ENST00000504072 156 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AC118282.1-201ENST00000506408 765 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 IGHV3-63-201ENST00000518422 341 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC118942.1-201ENST00000529674 1035 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 NPM1P35-201ENST00000533043 868 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC006349.1-201ENST00000555526 235 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC087783.2-201ENST00000605070 562 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 OR7A19P-201ENST00000608051 733 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 Mico1.1-201ENST00000611698 204 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AL049794.2-201ENST00000616301 365 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC006927.4-201ENST00000639187 543 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLCNKAP51800 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCNKAP51800 AC000374.1-201ENST00000434698 1745 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AC090971.4-201ENST00000560291 1800 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AL731566.1-201ENST00000620490 1937 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 AC009229.4-201ENST00000623854 1947 ntBASIC4.85□□□□□ -1.63
CLCNKAP51800 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCNKAP51800 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLCNKAP51800 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CLCNKAP51800 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CLCNKAP51800 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CLCNKAP51800 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCNKAP51800 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLCNKAP51800 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC4.84□□□□□ -1.63
CLCNKAP51800 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
CLCNKAP51800 SPATA2P1-201ENST00000431223 2055 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 AC021242.1-201ENST00000507315 2035 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.84□□□□□ -1.63
CLCNKAP51800 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.84□□□□□ -1.63
CLCNKAP51800 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CLCNKAP51800 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.84□□□□□ -1.63
CLCNKAP51800 AL627171.1-201ENST00000618845 1308 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 MFSD8-213ENST00000641134 1327 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 AC103591.2-201ENST00000265259 766 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CLCNKAP51800 VN1R51P-201ENST00000411675 945 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.84□□□□□ -1.63
CLCNKAP51800 RPL6P29-201ENST00000414863 865 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 AC008173.1-201ENST00000418901 264 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 USP9YP9-201ENST00000429406 715 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CLCNKAP51800 AC093414.1-201ENST00000434712 514 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 RPS7P2-201ENST00000435134 607 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 FABP5P3-201ENST00000437960 408 ntBASIC4.84□□□□□ -1.63
CLCNKAP51800 RRM2P4-201ENST00000441721 562 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms