Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC6.42□□□□□ -1.38
LIG3P49916 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG3P49916 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG3P49916 AC098824.1-201ENST00000453565 980 ntBASIC6.42□□□□□ -1.38
LIG3P49916 RN7SL221P-201ENST00000466190 281 ntBASIC6.42□□□□□ -1.38
LIG3P49916 MTND6P6-201ENST00000478031 263 ntBASIC6.42□□□□□ -1.38
LIG3P49916 RPL9P6-201ENST00000492764 598 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AC105252.1-201ENST00000503089 286 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.42□□□□□ -1.38
LIG3P49916 AC112484.3-201ENST00000505910 329 ntBASIC6.42□□□□□ -1.38
LIG3P49916 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG3P49916 AC091965.3-201ENST00000506236 208 ntBASIC6.42□□□□□ -1.38
LIG3P49916 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIG3P49916 SNORA48.10-201ENST00000516965 160 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC6.42□□□□□ -1.38
LIG3P49916 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIG3P49916 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC6.42□□□□□ -1.38
LIG3P49916 OR6C73P-201ENST00000546432 358 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.42□□□□□ -1.38
LIG3P49916 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG3P49916 SERPINE4P-201ENST00000554978 281 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG3P49916 NPM1P42-201ENST00000560329 862 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AC091489.2-201ENST00000566263 604 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG3P49916 MIR3154-201ENST00000577829 84 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AC233702.7-202ENST00000582941 211 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG3P49916 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG3P49916 MIR4719-201ENST00000585233 84 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.42□□□□□ -1.38
LIG3P49916 TAS2R6P-201ENST00000605022 826 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AC080013.4-201ENST00000607624 649 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AC004067.1-201ENST00000608733 700 ntBASIC6.42□□□□□ -1.38
LIG3P49916 MIR6806-201ENST00000622141 64 ntBASIC6.42□□□□□ -1.38
LIG3P49916 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.42□□□□□ -1.38
LIG3P49916 AC026634.1-201ENST00000634369 198 ntBASIC6.42□□□□□ -1.38
LIG3P49916 CASC19-246ENST00000641625 1606 ntBASIC6.42□□□□□ -1.38
LIG3P49916 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC6.42□□□□□ -1.38
LIG3P49916 AL355488.2-201ENST00000609909 2850 ntBASIC6.42□□□□□ -1.38
LIG3P49916 MTND4P16-201ENST00000466108 1367 ntBASIC6.42□□□□□ -1.38
LIG3P49916 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
LIG3P49916 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
LIG3P49916 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.42□□□□□ -1.38
LIG3P49916 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIG3P49916 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIG3P49916 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
LIG3P49916 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIG3P49916 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
LIG3P49916 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIG3P49916 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIG3P49916 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIG3P49916 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
LIG3P49916 RNU6-462P-201ENST00000362659 105 ntBASIC6.41□□□□□ -1.38
LIG3P49916 SNORD16-201ENST00000362803 99 ntBASIC6.41□□□□□ -1.38
LIG3P49916 RNU6-216P-201ENST00000363282 104 ntBASIC6.41□□□□□ -1.38
LIG3P49916 RNA5SP279-201ENST00000365513 117 ntBASIC6.41□□□□□ -1.38
LIG3P49916 RN7SKP187-201ENST00000365536 330 ntBASIC6.41□□□□□ -1.38
LIG3P49916 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
LIG3P49916 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
LIG3P49916 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.41□□□□□ -1.38
LIG3P49916 HSPD1P16-201ENST00000402302 394 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AC109780.2-201ENST00000413467 845 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AC092634.6-201ENST00000418558 192 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AIMP1P1-201ENST00000418670 937 ntBASIC6.41□□□□□ -1.38
LIG3P49916 RPS27AP14-201ENST00000422868 454 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AL157884.1-201ENST00000424561 454 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG3P49916 AC073335.1-201ENST00000427776 363 ntBASIC6.41□□□□□ -1.38
LIG3P49916 B3GNT2P1-201ENST00000434960 952 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG3P49916 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG3P49916 RPL26P28-201ENST00000451325 435 ntBASIC6.41□□□□□ -1.38
LIG3P49916 RPS3AP17-201ENST00000472594 777 ntBASIC6.41□□□□□ -1.38
LIG3P49916 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG3P49916 KRT19P6-201ENST00000510983 209 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AC022483.1-201ENST00000514020 567 ntBASIC6.41□□□□□ -1.38
LIG3P49916 RNA5SP473-201ENST00000516402 125 ntBASIC6.41□□□□□ -1.38
LIG3P49916 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG3P49916 AC008562.1-201ENST00000521763 330 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG3P49916 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.41□□□□□ -1.38
LIG3P49916 AL121579.2-201ENST00000555466 590 ntBASIC6.41□□□□□ -1.38
LIG3P49916 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG3P49916 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.41□□□□□ -1.38
LIG3P49916 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG3P49916 OR1E3-201ENST00000575608 948 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG3P49916 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC6.41□□□□□ -1.38
LIG3P49916 AP000860.1-201ENST00000605250 559 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AP002360.3-201ENST00000607673 710 ntBASIC6.41□□□□□ -1.38
LIG3P49916 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.41□□□□□ -1.38
LIG3P49916 AC091834.1-201ENST00000614543 472 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AL139089.1-201ENST00000620372 975 ntBASIC6.41□□□□□ -1.38
LIG3P49916 MIR6811-201ENST00000620409 58 ntBASIC6.41□□□□□ -1.38
LIG3P49916 AL683826.1-201ENST00000624104 627 ntBASIC6.41□□□□□ -1.38
LIG3P49916 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC6.41□□□□□ -1.38
LIG3P49916 AC111152.1-202ENST00000635848 339 ntBASIC6.41□□□□□ -1.38
LIG3P49916 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC6.41□□□□□ -1.38
LIG3P49916 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 151.4 ms