Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 AP001542.1-201ENST00000591314 200 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.01□□□□□ -1.77
CX3CR1P49238 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC4.01□□□□□ -1.77
CX3CR1P49238 AL133406.3-201ENST00000606817 541 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 MIR6853-201ENST00000619642 74 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.01□□□□□ -1.77
CX3CR1P49238 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CX3CR1P49238 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 SDAD1P1-202ENST00000524156 2051 ntBASIC4.01□□□□□ -1.77
CX3CR1P49238 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.01□□□□□ -1.77
CX3CR1P49238 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CX3CR1P49238 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CX3CR1P49238 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CX3CR1P49238 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4□□□□□ -1.77
CX3CR1P49238 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4□□□□□ -1.77
CX3CR1P49238 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4□□□□□ -1.77
CX3CR1P49238 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CX3CR1P49238 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CX3CR1P49238 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4□□□□□ -1.77
CX3CR1P49238 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4□□□□□ -1.77
CX3CR1P49238 FCF1P5-201ENST00000406490 482 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4□□□□□ -1.77
CX3CR1P49238 AL356806.1-201ENST00000422524 916 ntBASIC4□□□□□ -1.77
CX3CR1P49238 RNF19BPX-201ENST00000426224 625 ntBASIC4□□□□□ -1.77
CX3CR1P49238 DPY19L1P2-201ENST00000426647 915 ntBASIC4□□□□□ -1.77
CX3CR1P49238 RPL23AP25-201ENST00000430973 463 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AC069285.2-201ENST00000440210 275 ntBASIC4□□□□□ -1.77
CX3CR1P49238 XKRYP6-201ENST00000440468 1116 ntBASIC4□□□□□ -1.77
CX3CR1P49238 XKRYP3-201ENST00000442113 1116 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4□□□□□ -1.77
CX3CR1P49238 AL157827.1-201ENST00000447622 132 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AL627224.1-201ENST00000448334 444 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AC018638.3-201ENST00000461273 132 ntBASIC4□□□□□ -1.77
CX3CR1P49238 TSACC-207ENST00000470342 601 ntTSL 2 BASIC4□□□□□ -1.77
CX3CR1P49238 MTND6P6-201ENST00000478031 263 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AC113430.1-201ENST00000506872 718 ntBASIC4□□□□□ -1.77
CX3CR1P49238 RNA5SP446-201ENST00000515955 82 ntBASIC4□□□□□ -1.77
CX3CR1P49238 SNORA70.17-201ENST00000516449 133 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4□□□□□ -1.77
CX3CR1P49238 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4□□□□□ -1.77
CX3CR1P49238 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
CX3CR1P49238 AC100770.1-201ENST00000532310 322 ntBASIC4□□□□□ -1.77
CX3CR1P49238 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4□□□□□ -1.77
CX3CR1P49238 LINC02313-201ENST00000553330 550 ntTSL 2 BASIC4□□□□□ -1.77
CX3CR1P49238 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4□□□□□ -1.77
CX3CR1P49238 AC008759.1-201ENST00000589783 983 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4□□□□□ -1.77
CX3CR1P49238 RPL7P50-201ENST00000600588 727 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AC098935.2-201ENST00000604222 466 ntBASIC4□□□□□ -1.77
CX3CR1P49238 MIR4500HG-205ENST00000606590 579 ntTSL 4 BASIC4□□□□□ -1.77
CX3CR1P49238 AC017076.1-201ENST00000607613 578 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AC015813.4-201ENST00000610469 179 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AC090510.2-201ENST00000617465 629 ntBASIC4□□□□□ -1.77
CX3CR1P49238 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4□□□□□ -1.77
CX3CR1P49238 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4□□□□□ -1.77
CX3CR1P49238 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CX3CR1P49238 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
CX3CR1P49238 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CX3CR1P49238 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CX3CR1P49238 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CX3CR1P49238 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4□□□□□ -1.77
CX3CR1P49238 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CX3CR1P49238 ZNF137P-201ENST00000456718 1920 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CR1P49238 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CR1P49238 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CR1P49238 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CR1P49238 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CR1P49238 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CR1P49238 AL359715.4-201ENST00000606629 1436 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CX3CR1P49238 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CX3CR1P49238 AL590240.1-201ENST00000334118 313 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 MIR421-201ENST00000365696 85 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CX3CR1P49238 AL109941.1-201ENST00000401925 229 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC3.99□□□□□ -1.77
CX3CR1P49238 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC3.99□□□□□ -1.77
CX3CR1P49238 ATG4AP1-201ENST00000416893 538 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CR1P49238 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC3.99□□□□□ -1.77
CX3CR1P49238 SLC9B1P4-201ENST00000421957 1288 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CR1P49238 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC3.99□□□□□ -1.77
CX3CR1P49238 NPM1P24-201ENST00000428039 894 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 PTMAP6-201ENST00000439110 327 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 MTCYBP12-201ENST00000440559 1134 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 RPL31P44-201ENST00000447680 377 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.99□□□□□ -1.77
CX3CR1P49238 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC3.99□□□□□ -1.77
CX3CR1P49238 HIGD1AP8-201ENST00000453927 274 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 AC010469.1-201ENST00000463864 576 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.99□□□□□ -1.77
CX3CR1P49238 AC025445.1-201ENST00000502728 300 ntBASIC3.99□□□□□ -1.77
CX3CR1P49238 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC3.99□□□□□ -1.77
CX3CR1P49238 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms