Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 AC105074.1-201ENST00000623380 3095 ntBASIC5.13□□□□□ -1.59
SCN4AP35499 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC5.13□□□□□ -1.59
SCN4AP35499 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
SCN4AP35499 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 ARAFP1-201ENST00000422172 605 ntBASIC5.12□□□□□ -1.59
SCN4AP35499 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN4AP35499 HMGN2P31-201ENST00000432430 273 ntBASIC5.12□□□□□ -1.59
SCN4AP35499 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN4AP35499 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.12□□□□□ -1.59
SCN4AP35499 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN4AP35499 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC5.12□□□□□ -1.59
SCN4AP35499 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 MIR3200-201ENST00000580767 85 ntBASIC5.12□□□□□ -1.59
SCN4AP35499 AC006272.2-201ENST00000594725 163 ntBASIC5.12□□□□□ -1.59
SCN4AP35499 AL391261.4-201ENST00000616012 481 ntBASIC5.12□□□□□ -1.59
SCN4AP35499 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC5.12□□□□□ -1.59
SCN4AP35499 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SCN4AP35499 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 AC139769.1-204ENST00000472297 1931 ntBASIC5.12□□□□□ -1.59
SCN4AP35499 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC5.12□□□□□ -1.59
SCN4AP35499 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SCN4AP35499 OR4A15-201ENST00000314706 1035 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 RN7SKP156-201ENST00000410308 342 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 DPPA2P2-201ENST00000418220 897 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 OR2AH1P-201ENST00000425717 928 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 TBCAP1-201ENST00000436520 327 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN4AP35499 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SCN4AP35499 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SCN4AP35499 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SCN4AP35499 AC026427.2-201ENST00000506228 536 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 RNA5SP303-201ENST00000516192 130 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC5.11□□□□□ -1.59
SCN4AP35499 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN4AP35499 ZNF415P1-201ENST00000582279 1166 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN4AP35499 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN4AP35499 AL442128.2-201ENST00000620246 1824 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN4AP35499 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN4AP35499 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.11□□□□□ -1.59
SCN4AP35499 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SCN4AP35499 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN4AP35499 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN4AP35499 EI24P3-201ENST00000399046 1062 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 FCF1P5-201ENST00000406490 482 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 TET1P1-201ENST00000426627 2301 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC5.11□□□□□ -1.59
SCN4AP35499 RPL21P91-201ENST00000429231 479 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN4AP35499 RPL35AP21-201ENST00000437667 333 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SCN4AP35499 AC138938.1-201ENST00000515431 782 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.11□□□□□ -1.59
SCN4AP35499 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.11□□□□□ -1.59
SCN4AP35499 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.11□□□□□ -1.59
SCN4AP35499 RPL21P12-201ENST00000559810 515 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.11□□□□□ -1.59
SCN4AP35499 AL159169.3-201ENST00000608871 561 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 AC015804.1-201ENST00000622935 435 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.11□□□□□ -1.59
SCN4AP35499 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN4AP35499 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN4AP35499 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SCN4AP35499 AC006971.1-201ENST00000407916 4486 ntBASIC5.11□□□□□ -1.59
SCN4AP35499 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
SCN4AP35499 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SCN4AP35499 AC073346.2-201ENST00000624724 2058 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN4AP35499 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN4AP35499 A2MP1-204ENST00000566278 4130 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
SCN4AP35499 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
SCN4AP35499 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.1□□□□□ -1.59
SCN4AP35499 SNORA74C-2-201ENST00000411179 201 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 AC062016.2-201ENST00000420950 676 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 PDSS1P1-201ENST00000422953 1114 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 TMX2P1-201ENST00000436507 708 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 UBE2V1P3-201ENST00000439651 417 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 RPS4XP12-201ENST00000461747 709 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 AC007688.1-201ENST00000475592 759 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 CAB39P1-201ENST00000502277 460 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC5.1□□□□□ -1.59
SCN4AP35499 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC5.1□□□□□ -1.59
SCN4AP35499 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN4AP35499 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN4AP35499 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.1□□□□□ -1.59
SCN4AP35499 AL359922.3-201ENST00000624779 1670 ntBASIC5.1□□□□□ -1.59
SCN4AP35499 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms