Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.6□□□□□ -1.51
TM4SF1P30408 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.6□□□□□ -1.51
TM4SF1P30408 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
TM4SF1P30408 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
TM4SF1P30408 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF1P30408 RNU6-31P-201ENST00000384388 108 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 MIR670-201ENST00000390142 98 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF1P30408 RNU6-628P-201ENST00000410675 107 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 OR8G2P-201ENST00000412796 908 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.6□□□□□ -1.51
TM4SF1P30408 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.6□□□□□ -1.51
TM4SF1P30408 AC019070.1-201ENST00000415008 1024 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC5.6□□□□□ -1.51
TM4SF1P30408 RPL23AP52-201ENST00000439311 478 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 AL513321.1-201ENST00000441175 761 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.6□□□□□ -1.51
TM4SF1P30408 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.6□□□□□ -1.51
TM4SF1P30408 AC017099.1-201ENST00000448261 1028 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 CALM1P2-201ENST00000452941 448 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 RPL5P32-201ENST00000454085 879 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 RN7SL132P-201ENST00000478131 296 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.6□□□□□ -1.51
TM4SF1P30408 RNA5SP143-201ENST00000516936 115 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.6□□□□□ -1.51
TM4SF1P30408 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC5.6□□□□□ -1.51
TM4SF1P30408 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.6□□□□□ -1.51
TM4SF1P30408 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.6□□□□□ -1.51
TM4SF1P30408 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.6□□□□□ -1.51
TM4SF1P30408 CYCSP40-201ENST00000575927 294 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.6□□□□□ -1.51
TM4SF1P30408 MTCO3P22-201ENST00000603219 784 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 AC079587.1-201ENST00000603846 277 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 AL355802.4-201ENST00000607635 548 ntBASIC5.6□□□□□ -1.51
TM4SF1P30408 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.6□□□□□ -1.51
TM4SF1P30408 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF1P30408 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF1P30408 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF1P30408 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF1P30408 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
TM4SF1P30408 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 AL136164.3-201ENST00000624429 3978 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF1P30408 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.59□□□□□ -1.51
TM4SF1P30408 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF1P30408 VPS35P1-201ENST00000563400 1518 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF1P30408 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.59□□□□□ -1.51
TM4SF1P30408 Z95114.1-201ENST00000624264 14574 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF1P30408 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.59□□□□□ -1.51
TM4SF1P30408 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF1P30408 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TM4SF1P30408 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF1P30408 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TM4SF1P30408 SNORA70.4-201ENST00000365509 134 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC5.59□□□□□ -1.51
TM4SF1P30408 MT-TP-201ENST00000387461 68 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 Z86062.1-201ENST00000406773 777 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 AC007738.1-201ENST00000413892 348 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.59□□□□□ -1.51
TM4SF1P30408 RPL21P89-201ENST00000444021 467 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 HSPE1P22-201ENST00000456856 327 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
TM4SF1P30408 RPL35P6-201ENST00000490024 372 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF1P30408 AC097486.1-201ENST00000515331 210 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC5.59□□□□□ -1.51
TM4SF1P30408 OR8X1P-201ENST00000534542 869 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF1P30408 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5.59□□□□□ -1.51
TM4SF1P30408 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 AL671309.1-201ENST00000603750 544 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 AC007423.1-201ENST00000605009 627 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
TM4SF1P30408 RPL23AP61-201ENST00000623642 466 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF1P30408 CFTRP2-201ENST00000634304 199 ntBASIC5.59□□□□□ -1.51
TM4SF1P30408 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF1P30408 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.59□□□□□ -1.51
TM4SF1P30408 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF1P30408 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
TM4SF1P30408 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
TM4SF1P30408 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
TM4SF1P30408 AL445487.1-201ENST00000415694 1580 ntBASIC5.59□□□□□ -1.52
TM4SF1P30408 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
TM4SF1P30408 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
TM4SF1P30408 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
TM4SF1P30408 WDR5B-201ENST00000330689 3720 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
TM4SF1P30408 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.58□□□□□ -1.52
TM4SF1P30408 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
TM4SF1P30408 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms