Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC063949.1-201ENST00000552900 865 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.85□□□□□ -1.63
ABCD3P28288 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.85□□□□□ -1.63
ABCD3P28288 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC4.85□□□□□ -1.63
ABCD3P28288 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.85□□□□□ -1.63
ABCD3P28288 AL049838.1-201ENST00000563647 981 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.85□□□□□ -1.63
ABCD3P28288 AL162431.4-201ENST00000604674 411 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 AL392112.1-201ENST00000605115 829 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 AC026790.2-201ENST00000606282 430 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 AP000238.1-201ENST00000608759 426 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 AC099676.1-201ENST00000608886 657 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 AP002505.2-201ENST00000623585 696 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC4.85□□□□□ -1.63
ABCD3P28288 MAPK10-304ENST00000641341 3984 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 RARSP1-201ENST00000542842 1418 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ABCD3P28288 AL590763.1-201ENST00000398297 1545 ntBASIC4.85□□□□□ -1.63
ABCD3P28288 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ABCD3P28288 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.85□□□□□ -1.63
ABCD3P28288 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.85□□□□□ -1.63
ABCD3P28288 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ABCD3P28288 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ABCD3P28288 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC4.85□□□□□ -1.63
ABCD3P28288 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
ABCD3P28288 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.85□□□□□ -1.63
ABCD3P28288 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
ABCD3P28288 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ABCD3P28288 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
ABCD3P28288 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
ABCD3P28288 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.85□□□□□ -1.63
ABCD3P28288 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
ABCD3P28288 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ABCD3P28288 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCD3P28288 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ABCD3P28288 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC4.84□□□□□ -1.63
ABCD3P28288 XPOTP1-201ENST00000443317 2398 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ABCD3P28288 ZNF573-208ENST00000536220 2257 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ABCD3P28288 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ABCD3P28288 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
ABCD3P28288 CR788268.1-201ENST00000603931 1809 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
ABCD3P28288 PANDAR-201ENST00000629595 1506 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.84□□□□□ -1.63
ABCD3P28288 OR9K1P-201ENST00000326513 941 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ABCD3P28288 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
ABCD3P28288 SNORA48.4-201ENST00000391089 134 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 RNA5SP241-201ENST00000391326 114 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ABCD3P28288 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
ABCD3P28288 EIF4A1P3-201ENST00000411521 244 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 MTATP6P20-201ENST00000414147 562 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.84□□□□□ -1.63
ABCD3P28288 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.84□□□□□ -1.63
ABCD3P28288 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 IPMKP1-201ENST00000425988 855 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 CNOT7P2-201ENST00000441051 832 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 AL163193.1-201ENST00000444895 788 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 NOP56P2-201ENST00000447491 769 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC4.84□□□□□ -1.63
ABCD3P28288 NPM1P13-201ENST00000452663 865 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC4.84□□□□□ -1.63
ABCD3P28288 AC074386.1-201ENST00000476560 767 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 RN7SL177P-201ENST00000476596 299 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 GAPDHP39-201ENST00000481866 979 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 AC126121.1-201ENST00000482313 553 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.84□□□□□ -1.63
ABCD3P28288 RPL15P21-201ENST00000495592 567 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.84□□□□□ -1.63
ABCD3P28288 SEMA6A-AS2-201ENST00000508766 482 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 GTF2F2P1-201ENST00000511083 675 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 AC012400.1-201ENST00000518452 381 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 IGLV2-28-201ENST00000520681 304 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 AF279873.1-201ENST00000523393 313 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC4.84□□□□□ -1.63
ABCD3P28288 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 AC024940.3-201ENST00000538551 316 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.84□□□□□ -1.63
ABCD3P28288 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.84□□□□□ -1.63
ABCD3P28288 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.84□□□□□ -1.63
ABCD3P28288 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.84□□□□□ -1.63
ABCD3P28288 AP005262.1-201ENST00000582646 997 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 MIR4760-201ENST00000585040 80 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
ABCD3P28288 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
ABCD3P28288 AC011453.2-201ENST00000603737 729 ntBASIC4.84□□□□□ -1.63
ABCD3P28288 AC008814.1-201ENST00000603797 406 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms