Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC7.22□□□□□ -1.25
TOP2AP11388 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC7.22□□□□□ -1.25
TOP2AP11388 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TOP2AP11388 AC007066.1-201ENST00000392902 381 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 CTSL3P-202ENST00000412179 788 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 VDAC1P9-201ENST00000412766 841 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 AL050321.1-201ENST00000432363 400 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
TOP2AP11388 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC7.22□□□□□ -1.25
TOP2AP11388 TRAPPC2P2-201ENST00000517589 409 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC7.22□□□□□ -1.25
TOP2AP11388 CYCSP28-201ENST00000534284 321 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC7.22□□□□□ -1.25
TOP2AP11388 RN7SL339P-201ENST00000580597 296 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 AC010487.1-201ENST00000594408 1172 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 AC020978.9-201ENST00000624380 1141 ntBASIC7.22□□□□□ -1.25
TOP2AP11388 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC7.22□□□□□ -1.25
TOP2AP11388 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC7.21□□□□□ -1.25
TOP2AP11388 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC7.21□□□□□ -1.26
TOP2AP11388 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
TOP2AP11388 SNORA60-201ENST00000362396 134 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 RN7SKP186-201ENST00000365371 303 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 SNORA9-201ENST00000384215 133 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 SNORD96B-201ENST00000386148 79 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 AL358178.1-201ENST00000407698 397 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 FCF1P7-201ENST00000451185 558 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 ACTR3P3-201ENST00000480448 893 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 IGKV1OR2-1-201ENST00000514060 354 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 RN7SL435P-201ENST00000584418 282 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 AP000473.2-201ENST00000602659 1537 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC7.21□□□□□ -1.26
TOP2AP11388 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC7.21□□□□□ -1.26
TOP2AP11388 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
TOP2AP11388 AC006042.3-201ENST00000454684 1469 ntBASIC7.21□□□□□ -1.26
TOP2AP11388 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
TOP2AP11388 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC7.2□□□□□ -1.26
TOP2AP11388 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TOP2AP11388 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC7.2□□□□□ -1.26
TOP2AP11388 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
TOP2AP11388 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TOP2AP11388 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TOP2AP11388 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC7.2□□□□□ -1.26
TOP2AP11388 GAPDHP36-201ENST00000480688 918 ntBASIC7.2□□□□□ -1.26
TOP2AP11388 SCARNA14-201ENST00000516903 136 ntBASIC7.2□□□□□ -1.26
TOP2AP11388 AC087369.1-201ENST00000520775 996 ntBASIC7.2□□□□□ -1.26
TOP2AP11388 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC7.2□□□□□ -1.26
TOP2AP11388 MIR3944-201ENST00000581277 108 ntBASIC7.2□□□□□ -1.26
TOP2AP11388 AC010503.3-201ENST00000594355 540 ntBASIC7.2□□□□□ -1.26
TOP2AP11388 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC7.2□□□□□ -1.26
TOP2AP11388 AC012314.7-201ENST00000619693 93 ntBASIC7.2□□□□□ -1.26
TOP2AP11388 PACRG-211ENST00000621363 360 ntTSL 5 BASIC7.2□□□□□ -1.26
TOP2AP11388 AC244100.1-202ENST00000621554 382 ntBASIC7.2□□□□□ -1.26
TOP2AP11388 AC140113.4-201ENST00000622087 222 ntBASIC7.2□□□□□ -1.26
TOP2AP11388 AC015908.5-201ENST00000623289 343 ntBASIC7.2□□□□□ -1.26
TOP2AP11388 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TOP2AP11388 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.2□□□□□ -1.26
TOP2AP11388 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
TOP2AP11388 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
TOP2AP11388 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
TOP2AP11388 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TOP2AP11388 AC000374.1-201ENST00000434698 1745 ntBASIC7.19□□□□□ -1.26
TOP2AP11388 RNA5SP372-201ENST00000390836 115 ntBASIC7.19□□□□□ -1.26
TOP2AP11388 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
TOP2AP11388 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC7.19□□□□□ -1.26
TOP2AP11388 NPM1P34-201ENST00000428821 893 ntBASIC7.19□□□□□ -1.26
TOP2AP11388 RPS26P2-201ENST00000440331 348 ntBASIC7.19□□□□□ -1.26
TOP2AP11388 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC7.19□□□□□ -1.26
TOP2AP11388 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC7.19□□□□□ -1.26
TOP2AP11388 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC7.19□□□□□ -1.26
TOP2AP11388 AC027176.2-201ENST00000559166 746 ntBASIC7.19□□□□□ -1.26
TOP2AP11388 AC093591.2-201ENST00000565254 3843 ntBASIC7.19□□□□□ -1.26
TOP2AP11388 AC019278.1-201ENST00000623516 479 ntBASIC7.19□□□□□ -1.26
TOP2AP11388 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
TOP2AP11388 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
TOP2AP11388 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TOP2AP11388 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TOP2AP11388 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
TOP2AP11388 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
TOP2AP11388 CRYBB2P1-203ENST00000415709 538 ntBASIC7.18□□□□□ -1.26
TOP2AP11388 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC7.18□□□□□ -1.26
TOP2AP11388 ANK3-207ENST00000460468 677 ntTSL 3 BASIC7.18□□□□□ -1.26
TOP2AP11388 RPL29P14-201ENST00000495837 428 ntBASIC7.18□□□□□ -1.26
TOP2AP11388 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC7.18□□□□□ -1.26
TOP2AP11388 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC7.18□□□□□ -1.26
TOP2AP11388 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.18□□□□□ -1.26
TOP2AP11388 QTRT1P1-201ENST00000604344 1078 ntBASIC7.18□□□□□ -1.26
TOP2AP11388 AC015967.1-201ENST00000619893 476 ntBASIC7.18□□□□□ -1.26
TOP2AP11388 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
TOP2AP11388 AP002512.4-202ENST00000641599 4530 ntBASIC7.18□□□□□ -1.26
TOP2AP11388 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TOP2AP11388 FASTKD2-201ENST00000236980 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
TOP2AP11388 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
TOP2AP11388 ZNF285B-201ENST00000561698 1767 ntBASIC7.18□□□□□ -1.26
TOP2AP11388 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC7.18□□□□□ -1.26
TOP2AP11388 CASC19-284ENST00000642142 1868 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC7.17□□□□□ -1.26
TOP2AP11388 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
TOP2AP11388 RNA5SP399-201ENST00000364003 117 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 RAD23BP3-201ENST00000454157 1152 ntBASIC7.17□□□□□ -1.26
TOP2AP11388 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms