Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 SEPT7P5-201ENST00000434048 306 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AL390119.1-201ENST00000440329 312 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 RPL23AP60-201ENST00000450011 454 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 COPS8P2-201ENST00000473228 627 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 CDC42P3-201ENST00000518493 633 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 IGKV2D-10-201ENST00000520194 281 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AC008507.1-201ENST00000587506 734 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 IMMP1LP3-201ENST00000604197 224 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 MIR6798-201ENST00000612887 67 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AP002505.2-201ENST00000623585 696 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 AC073869.7-201ENST00000640874 297 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 MAPK10-344ENST00000641718 3746 ntBASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
CSB-PGBD3P0DP91 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC109315.1-201ENST00000584143 1347 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 CEP152-201ENST00000325747 4986 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 RNU6-1042P-201ENST00000384204 107 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 RNU6-253P-201ENST00000384730 105 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 MIR16-1-201ENST00000385271 89 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC104297.1-201ENST00000393779 870 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 MRM2-202ENST00000407040 582 ntTSL 3 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC019050.1-201ENST00000418508 492 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 LINC02038-201ENST00000439074 702 ntTSL 4 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 RPS27AP3-201ENST00000453803 454 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 MTND1P16-201ENST00000465177 898 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 RN7SL352P-201ENST00000466002 277 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC115223.1-201ENST00000466377 870 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 OR2AO1P-201ENST00000476497 403 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC023424.2-201ENST00000493479 777 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC008628.2-201ENST00000502605 298 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 ARL2BPP4-201ENST00000506854 471 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 RNA5SP92-201ENST00000516437 110 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 SCARNA6.1-201ENST00000516989 238 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 OR6M2P-201ENST00000529831 871 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 OR11J2P-201ENST00000555298 907 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 TXNP4-201ENST00000575018 310 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 OR4K7P-201ENST00000580232 945 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC119403.2-201ENST00000590960 598 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 FKBP1AP1-201ENST00000594588 318 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC087045.1-201ENST00000605856 382 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AC021106.3-201ENST00000623925 531 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 FER-210ENST00000628534 558 ntTSL 5 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 MAPK10-261ENST00000641050 3109 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 Z99496.1-201ENST00000469424 1477 ntBASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CSB-PGBD3P0DP91 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 106.4 ms