Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 ZNF137P-201ENST00000456718 1920 ntBASIC3.93□□□□□ -1.78
HLA-DPB1P04440 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 LIX1L-AS1-201ENST00000366105 377 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 GCNT6-201ENST00000379591 934 ntBASIC3.93□□□□□ -1.78
HLA-DPB1P04440 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 AC012671.1-201ENST00000451912 203 ntBASIC3.93□□□□□ -1.78
HLA-DPB1P04440 CEACAMP6-201ENST00000452007 574 ntBASIC3.93□□□□□ -1.78
HLA-DPB1P04440 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 RPL31P53-201ENST00000457065 348 ntBASIC3.93□□□□□ -1.78
HLA-DPB1P04440 MTND4LP2-201ENST00000502312 285 ntBASIC3.93□□□□□ -1.78
HLA-DPB1P04440 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 RNA5SP497-201ENST00000516081 97 ntBASIC3.93□□□□□ -1.78
HLA-DPB1P04440 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 AC012213.4-201ENST00000606457 354 ntBASIC3.93□□□□□ -1.78
HLA-DPB1P04440 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.93□□□□□ -1.78
HLA-DPB1P04440 AL356317.1-201ENST00000396110 1436 ntBASIC3.93□□□□□ -1.78
HLA-DPB1P04440 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
HLA-DPB1P04440 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 CPHL1P-201ENST00000461341 3407 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AC021146.4-201ENST00000309229 279 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 RNU6-386P-201ENST00000362650 107 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AC240504.1-201ENST00000395709 845 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 RNU2-50P-201ENST00000410494 143 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 RPS12P10-201ENST00000427031 377 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AL121877.1-201ENST00000453704 622 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AC010326.1-201ENST00000462726 602 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 RPS26P15-201ENST00000488067 348 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AC007016.1-201ENST00000512110 244 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AL358913.1-201ENST00000554342 121 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AL133338.2-201ENST00000604292 736 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AL008729.2-201ENST00000606393 473 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AL133406.3-201ENST00000606817 541 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 LINC00901.1-201ENST00000617252 152 ntBASIC3.92□□□□□ -1.78
HLA-DPB1P04440 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
HLA-DPB1P04440 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 MIR365B-201ENST00000362317 111 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AL049697.2-201ENST00000403708 294 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 MIR1911-201ENST00000410783 80 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC019050.1-201ENST00000418508 492 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 AC069213.2-201ENST00000420238 366 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 HMGB1P32-201ENST00000425971 565 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 Z85994.2-201ENST00000434327 452 ntBASIC3.91□□□□□ -1.78
HLA-DPB1P04440 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC3.91□□□□□ -1.78
HLA-DPB1P04440 RAB28P3-201ENST00000448325 597 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms