Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.89□□□□□ -1.63
VTNP04004 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
VTNP04004 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VTNP04004 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VTNP04004 NXPH1-205ENST00000602349 1953 ntBASIC4.88□□□□□ -1.63
VTNP04004 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 RNU6-1263P-201ENST00000384601 106 ntBASIC4.88□□□□□ -1.63
VTNP04004 FCF1P5-201ENST00000406490 482 ntBASIC4.88□□□□□ -1.63
VTNP04004 AMZ2P2-201ENST00000406819 1057 ntBASIC4.88□□□□□ -1.63
VTNP04004 RPL23AP26-201ENST00000412728 464 ntBASIC4.88□□□□□ -1.63
VTNP04004 DPPA2P2-201ENST00000418220 897 ntBASIC4.88□□□□□ -1.63
VTNP04004 Z74021.1-201ENST00000423610 407 ntBASIC4.88□□□□□ -1.63
VTNP04004 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VTNP04004 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.88□□□□□ -1.63
VTNP04004 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC4.88□□□□□ -1.63
VTNP04004 AL512625.3-204ENST00000438699 1031 ntTSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 RPL23AP52-201ENST00000439311 478 ntBASIC4.88□□□□□ -1.63
VTNP04004 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC4.88□□□□□ -1.63
VTNP04004 AC105137.1-201ENST00000484355 562 ntBASIC4.88□□□□□ -1.63
VTNP04004 AC041039.1-201ENST00000485656 536 ntBASIC4.88□□□□□ -1.63
VTNP04004 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.88□□□□□ -1.63
VTNP04004 RN7SKP21-201ENST00000516503 220 ntBASIC4.88□□□□□ -1.63
VTNP04004 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC4.88□□□□□ -1.63
VTNP04004 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.88□□□□□ -1.63
VTNP04004 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
VTNP04004 AL109766.1-201ENST00000555080 552 ntBASIC4.88□□□□□ -1.63
VTNP04004 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 AC091178.1-203ENST00000584586 279 ntBASIC4.88□□□□□ -1.63
VTNP04004 AC103792.1-201ENST00000603591 919 ntBASIC4.88□□□□□ -1.63
VTNP04004 HMGB1P51-201ENST00000605166 638 ntBASIC4.88□□□□□ -1.63
VTNP04004 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 AL356490.1-201ENST00000623079 479 ntBASIC4.88□□□□□ -1.63
VTNP04004 AC106730.3-201ENST00000624568 641 ntBASIC4.88□□□□□ -1.63
VTNP04004 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC4.88□□□□□ -1.63
VTNP04004 EIF2AP4-201ENST00000424793 1781 ntBASIC4.88□□□□□ -1.63
VTNP04004 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
VTNP04004 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
VTNP04004 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
VTNP04004 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VTNP04004 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.87□□□□□ -1.63
VTNP04004 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.87□□□□□ -1.63
VTNP04004 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 AL121657.1-201ENST00000327215 531 ntBASIC4.87□□□□□ -1.63
VTNP04004 RNU1-132P-201ENST00000364300 164 ntBASIC4.87□□□□□ -1.63
VTNP04004 RPS20P14-201ENST00000412545 360 ntBASIC4.87□□□□□ -1.63
VTNP04004 NRBF2P2-201ENST00000413087 861 ntBASIC4.87□□□□□ -1.63
VTNP04004 GTF2IP2-201ENST00000424290 697 ntBASIC4.87□□□□□ -1.63
VTNP04004 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.87□□□□□ -1.63
VTNP04004 MTCO1P45-201ENST00000431457 267 ntBASIC4.87□□□□□ -1.63
VTNP04004 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.87□□□□□ -1.63
VTNP04004 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 AP002345.1-201ENST00000456493 928 ntBASIC4.87□□□□□ -1.63
VTNP04004 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.87□□□□□ -1.63
VTNP04004 UQCRHP4-201ENST00000471686 272 ntBASIC4.87□□□□□ -1.63
VTNP04004 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VTNP04004 AC069304.1-201ENST00000491593 704 ntBASIC4.87□□□□□ -1.63
VTNP04004 AC091167.1-201ENST00000492017 396 ntBASIC4.87□□□□□ -1.63
VTNP04004 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC4.87□□□□□ -1.63
VTNP04004 HMGB1P47-201ENST00000511281 589 ntBASIC4.87□□□□□ -1.63
VTNP04004 RNA5SP497-201ENST00000516081 97 ntBASIC4.87□□□□□ -1.63
VTNP04004 MRPL49P2-201ENST00000521066 465 ntBASIC4.87□□□□□ -1.63
VTNP04004 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.87□□□□□ -1.63
VTNP04004 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 AC068993.1-201ENST00000546724 589 ntBASIC4.87□□□□□ -1.63
VTNP04004 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.87□□□□□ -1.63
VTNP04004 AL136520.1-202ENST00000555494 763 ntBASIC4.87□□□□□ -1.63
VTNP04004 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 AC090515.3-201ENST00000560431 315 ntBASIC4.87□□□□□ -1.63
VTNP04004 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.87□□□□□ -1.63
VTNP04004 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.87□□□□□ -1.63
VTNP04004 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 AL158211.2-201ENST00000607282 395 ntBASIC4.87□□□□□ -1.63
VTNP04004 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTNP04004 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 uc_338.13-201ENST00000618243 179 ntBASIC4.87□□□□□ -1.63
VTNP04004 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.87□□□□□ -1.63
VTNP04004 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTNP04004 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.87□□□□□ -1.63
VTNP04004 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
VTNP04004 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
VTNP04004 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
VTNP04004 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VTNP04004 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VTNP04004 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 129.2 ms