Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNOT4O95628 OR52E6-202ENST00000379946 954 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNOT4O95628 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 RPL21P108-201ENST00000413857 481 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 RPS7P13-201ENST00000413955 498 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC5.51□□□□□ -1.53
CNOT4O95628 TRAPPC2P10-201ENST00000415662 323 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AC245052.5-201ENST00000416320 649 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 MRPS36P1-201ENST00000421291 307 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AC009965.2-201ENST00000425328 970 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNOT4O95628 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.51□□□□□ -1.53
CNOT4O95628 NPM1P22-201ENST00000427761 952 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC5.51□□□□□ -1.53
CNOT4O95628 FAM96AP1-201ENST00000430879 482 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 PPIAP13-201ENST00000434706 478 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 AL391987.1-201ENST00000441025 200 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 DNAJC19P1-201ENST00000455312 319 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 RANP2-201ENST00000456833 229 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 UCK2-205ENST00000469256 753 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 TRBV8-2-201ENST00000475637 270 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.51□□□□□ -1.53
CNOT4O95628 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 HMGB1P36-201ENST00000487709 576 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 NPM1P27-201ENST00000502784 830 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.51□□□□□ -1.53
CNOT4O95628 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC5.51□□□□□ -1.53
CNOT4O95628 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.51□□□□□ -1.53
CNOT4O95628 AC104108.1-201ENST00000509930 412 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 GAPDHP62-201ENST00000515313 990 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 RNU6-506P-201ENST00000516553 94 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.51□□□□□ -1.53
CNOT4O95628 AC092709.1-201ENST00000521355 1045 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.51□□□□□ -1.53
CNOT4O95628 AP001858.2-201ENST00000536213 601 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.51□□□□□ -1.53
CNOT4O95628 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CNOT4O95628 AL121579.2-201ENST00000555466 590 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AC009063.1-201ENST00000563342 702 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC5.51□□□□□ -1.53
CNOT4O95628 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.51□□□□□ -1.53
CNOT4O95628 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 OR4K7P-201ENST00000580232 945 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.51□□□□□ -1.53
CNOT4O95628 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 RPSAP75-201ENST00000605848 301 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AP001330.5-201ENST00000607176 411 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AP005137.2-201ENST00000609238 400 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AL589743.7-201ENST00000612637 233 ntBASIC5.51□□□□□ -1.53
CNOT4O95628 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.51□□□□□ -1.53
CNOT4O95628 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.51□□□□□ -1.53
CNOT4O95628 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNOT4O95628 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
CNOT4O95628 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
CNOT4O95628 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.51□□□□□ -1.53
CNOT4O95628 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC5.51□□□□□ -1.53
CNOT4O95628 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.51□□□□□ -1.53
CNOT4O95628 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.51□□□□□ -1.53
CNOT4O95628 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.51□□□□□ -1.53
CNOT4O95628 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CNOT4O95628 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNOT4O95628 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CNOT4O95628 GRIA2-202ENST00000296526 5621 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNOT4O95628 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CNOT4O95628 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC5.5□□□□□ -1.53
CNOT4O95628 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNOT4O95628 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNOT4O95628 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CNOT4O95628 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC5.5□□□□□ -1.53
CNOT4O95628 FGF7P2-201ENST00000332473 296 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CNOT4O95628 Y_RNA.11-201ENST00000362375 109 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 SNORA51.1-201ENST00000363243 140 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.5□□□□□ -1.53
CNOT4O95628 RNU6-259P-201ENST00000383999 107 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CNOT4O95628 OR6C69P-201ENST00000394268 893 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 MIR1303-201ENST00000408625 86 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 RN7SKP161-201ENST00000411110 305 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC5.5□□□□□ -1.53
CNOT4O95628 ATG4AP1-201ENST00000416893 538 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.5□□□□□ -1.53
CNOT4O95628 AC019050.1-201ENST00000418508 492 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC5.5□□□□□ -1.53
CNOT4O95628 RPS7P14-201ENST00000426405 583 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.5□□□□□ -1.53
CNOT4O95628 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.5□□□□□ -1.53
CNOT4O95628 TRIM60P16-201ENST00000444048 694 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 HMGB1P16-201ENST00000447155 540 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 RPL5P24-201ENST00000463742 885 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 MTND1P16-201ENST00000465177 898 ntBASIC5.5□□□□□ -1.53
CNOT4O95628 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms