Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT3O75175 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CNOT3O75175 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT3O75175 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT3O75175 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.03□□□□□ -1.6
CNOT3O75175 RNU6-31P-201ENST00000384388 108 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 MIR937-201ENST00000401271 86 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 PPIAP9-201ENST00000403866 498 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 RN7SKP213-201ENST00000410746 298 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 MTND4P3-201ENST00000417829 541 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT3O75175 AC090960.1-201ENST00000421072 306 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC093655.2-201ENST00000425735 631 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT3O75175 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC5.03□□□□□ -1.6
CNOT3O75175 RPL19P16-201ENST00000433839 588 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC084290.1-201ENST00000434995 374 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 CLUHP1-201ENST00000435012 1190 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT3O75175 THAP5P1-201ENST00000439089 262 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.03□□□□□ -1.6
CNOT3O75175 AC069540.1-201ENST00000446320 988 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 MTND1P29-201ENST00000448112 647 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 TRY2P-201ENST00000448860 689 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AL591623.2-201ENST00000449978 222 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 ART2BP-201ENST00000453501 499 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC005410.1-202ENST00000460347 485 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 RN7SL610P-201ENST00000463845 291 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 RN7SL329P-201ENST00000467740 299 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT3O75175 AC092754.1-201ENST00000472975 479 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC022795.1-201ENST00000473808 480 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 RPL7AP6-201ENST00000477943 801 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.03□□□□□ -1.6
CNOT3O75175 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC5.03□□□□□ -1.6
CNOT3O75175 AC026414.1-201ENST00000504046 698 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC091951.3-201ENST00000504093 246 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 SNRPCP2-201ENST00000504370 475 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT3O75175 AC091435.1-201ENST00000505442 584 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 GNPDA2-202ENST00000507534 1050 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT3O75175 AC110775.1-201ENST00000513721 462 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.03□□□□□ -1.6
CNOT3O75175 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC5.03□□□□□ -1.6
CNOT3O75175 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT3O75175 AC090819.1-201ENST00000523800 1111 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC022832.1-201ENST00000530718 645 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 BNIP3P1-201ENST00000547295 580 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT3O75175 AL049830.4-201ENST00000555149 351 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AL121839.1-201ENST00000556233 1185 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.03□□□□□ -1.6
CNOT3O75175 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.03□□□□□ -1.6
CNOT3O75175 AC005341.1-201ENST00000571086 708 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 TAS2R6P-201ENST00000605022 826 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC024940.4-201ENST00000605507 246 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC007349.4-201ENST00000608114 532 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.03□□□□□ -1.6
CNOT3O75175 AL121612.2-201ENST00000612261 482 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.03□□□□□ -1.6
CNOT3O75175 AC009318.3-201ENST00000616916 503 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC074140.1-201ENST00000621617 208 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.03□□□□□ -1.6
CNOT3O75175 AC105105.5-201ENST00000622635 1294 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.03□□□□□ -1.6
CNOT3O75175 UGP2-231ENST00000627474 264 ntTSL 5 BASIC5.03□□□□□ -1.6
CNOT3O75175 GMFB-210ENST00000628554 639 ntTSL 4 BASIC5.03□□□□□ -1.6
CNOT3O75175 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC5.03□□□□□ -1.6
CNOT3O75175 AL596275.2-204ENST00000641628 552 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC139713.2-210ENST00000641741 992 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AL596275.2-206ENST00000641957 626 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.03□□□□□ -1.6
CNOT3O75175 AP000542.2-201ENST00000623199 6179 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT3O75175 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CNOT3O75175 AC092111.2-201ENST00000611627 1414 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
CNOT3O75175 Z98755.1-201ENST00000407015 1384 ntBASIC5.03□□□□□ -1.6
CNOT3O75175 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.03□□□□□ -1.6
CNOT3O75175 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.61
CNOT3O75175 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.02□□□□□ -1.61
CNOT3O75175 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
CNOT3O75175 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT3O75175 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT3O75175 AL132640.2-201ENST00000559968 1698 ntBASIC5.02□□□□□ -1.61
CNOT3O75175 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC5.02□□□□□ -1.61
CNOT3O75175 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT3O75175 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.02□□□□□ -1.61
CNOT3O75175 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT3O75175 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT3O75175 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT3O75175 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT3O75175 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT3O75175 RNU6-1214P-201ENST00000363650 109 ntBASIC5.02□□□□□ -1.61
CNOT3O75175 RNU1-146P-201ENST00000364015 165 ntBASIC5.02□□□□□ -1.61
CNOT3O75175 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CNOT3O75175 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT3O75175 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC5.02□□□□□ -1.61
CNOT3O75175 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms