Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCN2BO60939 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.22□□□□□ -1.73
SCN2BO60939 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
SCN2BO60939 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.22□□□□□ -1.73
SCN2BO60939 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.22□□□□□ -1.73
SCN2BO60939 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SCN2BO60939 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 RNA5SP87-201ENST00000384155 118 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 RNA5SP397-201ENST00000391323 118 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 RNA5SP104-201ENST00000410989 118 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 GSTM3P2-201ENST00000412746 530 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 ARAFP1-201ENST00000422172 605 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 CENPIP1-201ENST00000425713 902 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 SEC63P1-201ENST00000425785 1258 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 AL590762.4-201ENST00000425885 253 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 AL049745.1-201ENST00000433953 286 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 MAPRE1P3-201ENST00000435438 796 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 RPL23AP93-201ENST00000440847 484 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 RAB28P3-201ENST00000448325 597 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 AC079804.1-201ENST00000461922 436 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 AC010469.1-201ENST00000463864 576 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 RN7SL826P-201ENST00000479724 288 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 AC083829.1-201ENST00000503756 657 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.22□□□□□ -1.73
SCN2BO60939 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN2BO60939 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.22□□□□□ -1.73
SCN2BO60939 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN2BO60939 AC068714.1-201ENST00000559623 800 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN2BO60939 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.22□□□□□ -1.73
SCN2BO60939 AL133338.2-201ENST00000604292 736 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 AC090953.1-201ENST00000604305 1092 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 AC034236.3-201ENST00000605999 461 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 AP006248.2-201ENST00000623309 592 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 AC007546.2-201ENST00000623996 360 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 MIR6715B-201ENST00000637172 77 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 KPNA2P2-201ENST00000419546 1489 ntBASIC4.22□□□□□ -1.73
SCN2BO60939 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
SCN2BO60939 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
SCN2BO60939 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.73
SCN2BO60939 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
SCN2BO60939 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.73
SCN2BO60939 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.73
SCN2BO60939 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.73
SCN2BO60939 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCN2BO60939 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCN2BO60939 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SCN2BO60939 AC010132.2-201ENST00000295493 1043 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCN2BO60939 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
SCN2BO60939 AC067945.1-201ENST00000342609 618 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 SNORA71.2-201ENST00000364941 134 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN2BO60939 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 MIR550A3-201ENST00000390735 95 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.21□□□□□ -1.74
SCN2BO60939 AL049697.2-201ENST00000403708 294 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
SCN2BO60939 RWDD4P2-201ENST00000426392 563 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN2BO60939 AC069285.2-201ENST00000440210 275 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN2BO60939 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN2BO60939 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN2BO60939 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.21□□□□□ -1.74
SCN2BO60939 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.21□□□□□ -1.74
SCN2BO60939 RWDD4P1-201ENST00000488019 565 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 IGLV2-34-201ENST00000490007 283 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
SCN2BO60939 OR51K1P-201ENST00000510214 950 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 RNA5SP154-201ENST00000516193 111 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 RNU4-18P-201ENST00000516751 149 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 SMARCE1P4-201ENST00000523647 241 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 AP000827.1-201ENST00000527814 258 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC4.21□□□□□ -1.74
SCN2BO60939 RN7SL690P-201ENST00000582087 240 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.21□□□□□ -1.74
SCN2BO60939 AC015922.4-201ENST00000612568 690 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 AL138721.1-201ENST00000616756 179 ntBASIC4.21□□□□□ -1.74
SCN2BO60939 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCN2BO60939 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
SCN2BO60939 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.2□□□□□ -1.74
SCN2BO60939 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCN2BO60939 AC018529.3-201ENST00000624212 2254 ntBASIC4.2□□□□□ -1.74
SCN2BO60939 Y_RNA.62-201ENST00000362840 99 ntBASIC4.2□□□□□ -1.74
SCN2BO60939 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCN2BO60939 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms