Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 AL355433.1-201ENST00000422804 300 ntBASIC5.27□□□□□ -1.57
PROM1O43490 RIMKLBP2-201ENST00000424737 654 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.27□□□□□ -1.57
PROM1O43490 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.27□□□□□ -1.57
PROM1O43490 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.27□□□□□ -1.57
PROM1O43490 AC098826.1-201ENST00000433943 471 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AL627308.1-201ENST00000435693 821 ntBASIC5.27□□□□□ -1.57
PROM1O43490 CYCSP11-201ENST00000436426 315 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.27□□□□□ -1.57
PROM1O43490 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC5.27□□□□□ -1.57
PROM1O43490 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC5.27□□□□□ -1.57
PROM1O43490 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.27□□□□□ -1.57
PROM1O43490 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PROM1O43490 AL450023.1-201ENST00000450868 751 ntBASIC5.27□□□□□ -1.57
PROM1O43490 MRPL42P4-201ENST00000453267 443 ntBASIC5.27□□□□□ -1.57
PROM1O43490 USP9YP10-201ENST00000454868 628 ntBASIC5.27□□□□□ -1.57
PROM1O43490 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.27□□□□□ -1.57
PROM1O43490 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.27□□□□□ -1.57
PROM1O43490 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.27□□□□□ -1.57
PROM1O43490 AC080014.1-201ENST00000496877 1201 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 AC109481.1-201ENST00000509173 282 ntBASIC5.27□□□□□ -1.57
PROM1O43490 USP9YP5-201ENST00000511770 630 ntBASIC5.27□□□□□ -1.57
PROM1O43490 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC5.27□□□□□ -1.57
PROM1O43490 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.27□□□□□ -1.57
PROM1O43490 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.27□□□□□ -1.57
PROM1O43490 GVINP1-202ENST00000531871 7271 ntBASIC5.27□□□□□ -1.57
PROM1O43490 RFPL1S-203ENST00000539579 330 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AC006206.1-201ENST00000544842 3387 ntBASIC5.27□□□□□ -1.57
PROM1O43490 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC5.27□□□□□ -1.57
PROM1O43490 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.27□□□□□ -1.57
PROM1O43490 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC5.27□□□□□ -1.57
PROM1O43490 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.27□□□□□ -1.57
PROM1O43490 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.27□□□□□ -1.57
PROM1O43490 AC002400.1-201ENST00000569310 726 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AC090616.2-202ENST00000584248 222 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AC018809.2-201ENST00000602436 3823 ntBASIC5.27□□□□□ -1.57
PROM1O43490 SGO1P1-201ENST00000603525 1447 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.27□□□□□ -1.57
PROM1O43490 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.27□□□□□ -1.57
PROM1O43490 AC004948.1-201ENST00000609858 672 ntBASIC5.27□□□□□ -1.57
PROM1O43490 FRG1HP-204ENST00000617940 757 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AC024023.1-201ENST00000624530 922 ntBASIC5.27□□□□□ -1.57
PROM1O43490 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.27□□□□□ -1.57
PROM1O43490 AC084035.1-201ENST00000634543 607 ntBASIC5.27□□□□□ -1.57
PROM1O43490 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.27□□□□□ -1.57
PROM1O43490 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.27□□□□□ -1.57
PROM1O43490 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.27□□□□□ -1.57
PROM1O43490 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PROM1O43490 AC007996.1-201ENST00000620414 2821 ntBASIC5.27□□□□□ -1.57
PROM1O43490 MTND4P26-201ENST00000415971 1359 ntBASIC5.27□□□□□ -1.57
PROM1O43490 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
PROM1O43490 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PROM1O43490 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.26□□□□□ -1.57
PROM1O43490 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PROM1O43490 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.26□□□□□ -1.57
PROM1O43490 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PROM1O43490 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PROM1O43490 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.26□□□□□ -1.57
PROM1O43490 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.26□□□□□ -1.57
PROM1O43490 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
PROM1O43490 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
PROM1O43490 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
PROM1O43490 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
PROM1O43490 Y_RNA.77-201ENST00000362962 107 ntBASIC5.26□□□□□ -1.57
PROM1O43490 U3.7-201ENST00000363668 216 ntBASIC5.26□□□□□ -1.57
PROM1O43490 SNORA74A-201ENST00000364089 198 ntBASIC5.26□□□□□ -1.57
PROM1O43490 RNU6-157P-201ENST00000383957 107 ntBASIC5.26□□□□□ -1.57
PROM1O43490 RNU6-549P-201ENST00000384433 107 ntBASIC5.26□□□□□ -1.57
PROM1O43490 RNU6-244P-201ENST00000391028 104 ntBASIC5.26□□□□□ -1.57
PROM1O43490 FABP12P1-201ENST00000401911 322 ntBASIC5.26□□□□□ -1.57
PROM1O43490 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC5.26□□□□□ -1.57
PROM1O43490 Y_RNA.619-201ENST00000410951 90 ntBASIC5.26□□□□□ -1.57
PROM1O43490 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC5.26□□□□□ -1.57
PROM1O43490 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC5.26□□□□□ -1.57
PROM1O43490 AC002504.1-201ENST00000438281 691 ntBASIC5.26□□□□□ -1.57
PROM1O43490 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC5.26□□□□□ -1.57
PROM1O43490 AL354941.1-201ENST00000438600 464 ntBASIC5.26□□□□□ -1.57
PROM1O43490 NPM1P33-201ENST00000438918 872 ntBASIC5.26□□□□□ -1.57
PROM1O43490 MTCYBP34-201ENST00000439552 670 ntBASIC5.26□□□□□ -1.57
PROM1O43490 EEF1B2P6-201ENST00000445713 673 ntBASIC5.26□□□□□ -1.57
PROM1O43490 AL360221.1-201ENST00000445989 335 ntBASIC5.26□□□□□ -1.57
PROM1O43490 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC5.26□□□□□ -1.57
PROM1O43490 AZGP1P2-201ENST00000454506 345 ntBASIC5.26□□□□□ -1.57
PROM1O43490 RN7SL610P-201ENST00000463845 291 ntBASIC5.26□□□□□ -1.57
PROM1O43490 PSAT1P4-201ENST00000466500 526 ntBASIC5.26□□□□□ -1.57
PROM1O43490 RPL35AP19-201ENST00000469425 329 ntBASIC5.26□□□□□ -1.57
PROM1O43490 AC096741.1-201ENST00000472250 846 ntBASIC5.26□□□□□ -1.57
PROM1O43490 RPL23AP37-201ENST00000479658 549 ntBASIC5.26□□□□□ -1.57
PROM1O43490 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.26□□□□□ -1.57
PROM1O43490 AC138866.2-201ENST00000508650 584 ntBASIC5.26□□□□□ -1.57
PROM1O43490 MTCO3P7-201ENST00000510008 774 ntBASIC5.26□□□□□ -1.57
PROM1O43490 AC010625.1-201ENST00000511296 403 ntBASIC5.26□□□□□ -1.57
PROM1O43490 RPL12P22-201ENST00000519073 490 ntBASIC5.26□□□□□ -1.57
PROM1O43490 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms