Protein–RNA interactions for Protein: O43300

LRRTM2, Leucine-rich repeat transmembrane neuronal protein 2, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM2O43300 AP000580.1-201ENST00000404439 358 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRTM2O43300 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.49□□□□□ -1.69
LRRTM2O43300 AC073464.3-201ENST00000422564 712 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 SEC63P1-201ENST00000425785 1258 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 MRPS33P4-201ENST00000434892 317 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 MTCO3P43-201ENST00000440974 771 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRTM2O43300 PSMC1P13-201ENST00000458195 985 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 AC091180.1-201ENST00000462104 372 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 AK3P4-201ENST00000504283 583 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.49□□□□□ -1.69
LRRTM2O43300 RN7SKP276-201ENST00000516242 268 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 RNA5SP360-201ENST00000516555 118 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 MTCYBP19-201ENST00000517463 1124 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.49□□□□□ -1.69
LRRTM2O43300 MORF4L1P3-201ENST00000525966 950 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 AC022882.1-201ENST00000532142 501 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
LRRTM2O43300 AP001880.2-201ENST00000538233 448 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRTM2O43300 AL110118.1-201ENST00000553543 400 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 CYCSP40-201ENST00000575927 294 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 MIR4277-201ENST00000578298 84 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRTM2O43300 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.49□□□□□ -1.69
LRRTM2O43300 HPVC1-201ENST00000629899 1198 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
LRRTM2O43300 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRTM2O43300 AC068446.1-201ENST00000556425 1549 ntBASIC4.49□□□□□ -1.69
LRRTM2O43300 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRTM2O43300 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
LRRTM2O43300 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.49□□□□□ -1.69
LRRTM2O43300 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
LRRTM2O43300 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.49□□□□□ -1.69
LRRTM2O43300 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.49□□□□□ -1.69
LRRTM2O43300 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.49□□□□□ -1.69
LRRTM2O43300 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.49□□□□□ -1.69
LRRTM2O43300 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 AL049555.1-201ENST00000562834 1933 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.48□□□□□ -1.69
LRRTM2O43300 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.48□□□□□ -1.69
LRRTM2O43300 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 OR51H2P-202ENST00000641424 3046 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 MIR92A2-201ENST00000385299 75 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 RN7SKP100-201ENST00000411258 284 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 MTATP6P11-201ENST00000428071 670 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 BX323845.1-201ENST00000432417 179 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 AL359265.2-201ENST00000434367 631 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.48□□□□□ -1.69
LRRTM2O43300 MRPL48P1-201ENST00000445390 636 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 RHEBP2-201ENST00000450289 600 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 IGHV5-78-201ENST00000450948 295 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 HGF-207ENST00000453018 721 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRTM2O43300 AL691482.1-201ENST00000453255 87 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRTM2O43300 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRTM2O43300 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.48□□□□□ -1.69
LRRTM2O43300 RPL5P13-201ENST00000462840 709 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 MTND6P6-201ENST00000478031 263 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRTM2O43300 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.48□□□□□ -1.69
LRRTM2O43300 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.48□□□□□ -1.69
LRRTM2O43300 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRTM2O43300 AC090819.1-201ENST00000523800 1111 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.48□□□□□ -1.69
LRRTM2O43300 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.48□□□□□ -1.69
LRRTM2O43300 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRTM2O43300 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRTM2O43300 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRTM2O43300 NDUFB4P11-201ENST00000560510 395 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 HNRNPCP4-201ENST00000571636 900 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRTM2O43300 MIR1254-2-201ENST00000579553 63 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.48□□□□□ -1.69
LRRTM2O43300 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRTM2O43300 AC093765.1-201ENST00000603758 881 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 AL590392.1-201ENST00000604960 446 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 AC073111.2-201ENST00000605657 1075 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 AC017076.1-201ENST00000607613 578 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 AC020923.1-201ENST00000624021 917 ntBASIC4.48□□□□□ -1.69
LRRTM2O43300 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRTM2O43300 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
LRRTM2O43300 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRTM2O43300 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC4.48□□□□□ -1.69
LRRTM2O43300 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
LRRTM2O43300 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms