Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 TAF9BP1-201ENST00000396646 746 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 RPL12P9-201ENST00000412942 488 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 OR6E1P-201ENST00000414424 923 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.33□□□□□ -1.56
PHGDHO43175 AL365338.1-201ENST00000422282 858 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.33□□□□□ -1.56
PHGDHO43175 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.33□□□□□ -1.56
PHGDHO43175 HSPD1P12-201ENST00000429127 1069 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PHGDHO43175 MTND1P32-201ENST00000433043 938 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.33□□□□□ -1.56
PHGDHO43175 AC090018.1-201ENST00000434369 367 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC5.33□□□□□ -1.56
PHGDHO43175 AC092393.1-201ENST00000439625 742 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AC093155.1-201ENST00000440164 826 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 PCNPP2-201ENST00000441651 455 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.33□□□□□ -1.56
PHGDHO43175 RPL21P134-201ENST00000453468 483 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 AL133477.1-201ENST00000457472 514 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AP000797.2-201ENST00000475768 606 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 RPL15P21-201ENST00000495592 567 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AC023424.1-201ENST00000496058 459 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC5.33□□□□□ -1.56
PHGDHO43175 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.33□□□□□ -1.56
PHGDHO43175 AC048346.1-201ENST00000510247 144 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AC116353.3-201ENST00000511215 249 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AC010486.3-201ENST00000511602 785 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC5.33□□□□□ -1.56
PHGDHO43175 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.33□□□□□ -1.56
PHGDHO43175 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AC087808.1-201ENST00000520501 361 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 RGS4-207ENST00000527809 817 ntTSL 4 BASIC5.33□□□□□ -1.56
PHGDHO43175 AC004217.3-201ENST00000551552 878 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AL049872.1-201ENST00000556323 322 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 NMNAT1P5-201ENST00000559657 841 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.33□□□□□ -1.56
PHGDHO43175 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 MTCYBP13-201ENST00000578634 1093 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 PRPF19P1-201ENST00000584766 898 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.33□□□□□ -1.56
PHGDHO43175 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC5.33□□□□□ -1.56
PHGDHO43175 AL360219.1-201ENST00000610230 366 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 AC121761.2-201ENST00000617300 689 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 AP003400.3-201ENST00000624904 346 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PHGDHO43175 AC015689.2-201ENST00000528172 1738 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHGDHO43175 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC5.33□□□□□ -1.56
PHGDHO43175 AC092162.3-201ENST00000624511 1624 ntBASIC5.33□□□□□ -1.56
PHGDHO43175 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PHGDHO43175 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHGDHO43175 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHGDHO43175 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.32□□□□□ -1.56
PHGDHO43175 LINC01963-201ENST00000562038 3148 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC5.32□□□□□ -1.56
PHGDHO43175 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.32□□□□□ -1.56
PHGDHO43175 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PHGDHO43175 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
PHGDHO43175 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC5.32□□□□□ -1.56
PHGDHO43175 AP001284.1-201ENST00000528393 2118 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.32□□□□□ -1.56
PHGDHO43175 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.32□□□□□ -1.56
PHGDHO43175 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 AL512646.1-201ENST00000269395 1077 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 OR9G4-201ENST00000302957 984 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 RNA5SP46-201ENST00000362370 120 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHGDHO43175 RNU6-157P-201ENST00000383957 107 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
PHGDHO43175 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC5.32□□□□□ -1.56
PHGDHO43175 RNU2-65P-201ENST00000410162 185 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AL450992.3-201ENST00000413192 568 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 OR2AT2P-201ENST00000413438 905 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.32□□□□□ -1.56
PHGDHO43175 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC5.32□□□□□ -1.56
PHGDHO43175 RPL34P3-201ENST00000421454 338 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AL139421.1-201ENST00000423010 169 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC5.32□□□□□ -1.56
PHGDHO43175 BLOC1S2P1-201ENST00000428431 301 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.32□□□□□ -1.56
PHGDHO43175 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC5.32□□□□□ -1.56
PHGDHO43175 ATP5F1P1-201ENST00000433775 569 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 GSTM5P1-201ENST00000434751 660 ntBASIC5.32□□□□□ -1.56
PHGDHO43175 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.32□□□□□ -1.56
PHGDHO43175 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 82.5 ms