Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC022431.1-201ENST00000450941 438 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AL133244.1-201ENST00000456007 258 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 RPL12P20-201ENST00000475538 479 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AL592156.1-201ENST00000508758 304 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC107016.1-201ENST00000550463 337 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC068446.3-201ENST00000555285 382 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 BPIFA4P-203ENST00000603168 689 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AL139286.1-201ENST00000604465 483 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 Mico1.1-201ENST00000611698 204 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC078899.5-201ENST00000612475 178 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC100827.5-201ENST00000615883 426 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 MIR6730-201ENST00000622213 67 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC091905.2-201ENST00000623143 306 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 LINC00622-201ENST00000562811 1570 ntBASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC3.37□□□□□ -1.87
HLA-DRB4X5D2U9 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 MIR513A2-201ENST00000385249 127 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AL049697.2-201ENST00000403708 294 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 JKAMPP1-201ENST00000413804 919 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 TRIM60P17-201ENST00000415181 719 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 RAD23BP1-201ENST00000421404 1227 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 RPS12P10-201ENST00000427031 377 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 HMGB3P10-201ENST00000434734 572 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 HLA-N-201ENST00000437516 135 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 ELOCP8-201ENST00000439309 332 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 ELOCP15-201ENST00000442090 332 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 RPL36AP15-201ENST00000444514 266 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC099063.2-201ENST00000446360 662 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 NDUFS5P3-201ENST00000450668 321 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC243772.1-201ENST00000451620 410 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 VN1R32P-201ENST00000452234 905 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 RNA5SP446-201ENST00000515955 82 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AP006289.1-201ENST00000538089 277 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 BNIP3P32-201ENST00000600015 554 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AL031666.3-201ENST00000609320 1006 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AL133243.1-201ENST00000614487 366 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 MIR6780A-201ENST00000615089 68 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC067852.7-201ENST00000623270 535 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AL359715.5-201ENST00000623431 443 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 LINC01808-202ENST00000641680 1116 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 AC139769.1-204ENST00000472297 1931 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 CPHL1P-201ENST00000461341 3407 ntBASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
HLA-DRB4X5D2U9 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.35□□□□□ -1.87
HLA-DRB4X5D2U9 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms