Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AC090971.4-201ENST00000560291 1800 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 ABCC13-202ENST00000463099 3842 ntBASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC6.08□□□□□ -1.44
COL4A3BPQ9Y5P4 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 TCP11X1-202ENST00000622971 1372 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 OR9K1P-201ENST00000326513 941 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 RNA5SP335-201ENST00000363817 110 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 RNU6-171P-201ENST00000384354 107 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 SNORD65.1-201ENST00000390889 71 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 SNORA68.2-201ENST00000391263 128 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 MIR1286-201ENST00000408112 78 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 ELOCP9-201ENST00000418624 239 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC009506.2-201ENST00000420635 840 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC233981.1-201ENST00000423224 461 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 IPMKP1-201ENST00000425988 855 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AL163193.1-201ENST00000444895 788 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC105399.1-202ENST00000447303 205 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 Z99714.1-201ENST00000450463 807 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC108734.3-201ENST00000481241 1165 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 EEF1A1P25-201ENST00000495704 1267 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 FTH1P24-201ENST00000503502 462 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC034244.1-201ENST00000507687 207 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC093755.1-201ENST00000512950 1023 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 RNA5SP34-201ENST00000516887 130 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 BLZF2P-201ENST00000553776 1130 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 MIR1269B-201ENST00000580405 75 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC107952.2-201ENST00000606048 486 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC010632.3-201ENST00000611377 369 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC073869.8-201ENST00000641806 335 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 OR6C71P-202ENST00000641886 1107 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 PANDAR-201ENST00000629595 1506 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC026523.2-201ENST00000625039 7739 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 ZNF876P-202ENST00000398732 1485 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC006484.1-201ENST00000435086 1884 ntBASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
COL4A3BPQ9Y5P4 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 RNA5SP183-201ENST00000362452 119 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 Y_RNA.465-201ENST00000384293 102 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 SNORA16A-201ENST00000384342 137 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 MIR217-201ENST00000384817 110 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 ADAM24P-201ENST00000398655 2101 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 VDAC2P1-201ENST00000399358 958 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 AC119751.3-201ENST00000399720 670 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 AL139098.1-201ENST00000407291 389 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 AL390774.1-201ENST00000411924 246 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 MRPS36P1-201ENST00000421291 307 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 Z93242.1-201ENST00000427102 353 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 RPL7L1P9-201ENST00000431298 745 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 RPL12P17-201ENST00000432393 498 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 SEPT7P5-201ENST00000434048 306 ntBASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC6.06□□□□□ -1.44
COL4A3BPQ9Y5P4 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms