Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 MIR6820-201ENST00000611508 62 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AL133370.2-201ENST00000619934 439 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 AC007275.1-201ENST00000621243 671 ntBASIC4.99□□□□□ -1.61
SIX4Q9UIU6 OR5R1-201ENST00000623286 975 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.99□□□□□ -1.61
SIX4Q9UIU6 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AC106754.1-201ENST00000562632 1513 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 SALL4P2-201ENST00000423288 2910 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 SNORA56-201ENST00000383966 129 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 RNA5SP332-201ENST00000391063 115 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AL080315.1-201ENST00000406055 466 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AC119751.6-201ENST00000416712 186 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 RPA2P2-201ENST00000419698 796 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 USP12PY-201ENST00000427677 1064 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 OR52A4P-201ENST00000472867 958 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AC121161.1-201ENST00000510606 652 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 ZKSCAN7P1-201ENST00000543668 673 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 MTND1P24-201ENST00000552175 861 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AC015912.2-201ENST00000571053 181 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AF230666.2-201ENST00000602328 725 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AC067838.1-201ENST00000606064 577 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AP000770.2-201ENST00000623694 100 ntBASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SIX4Q9UIU6 AL136164.3-201ENST00000624429 3978 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 ZNF137P-201ENST00000456718 1920 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 OR14L1P-202ENST00000641545 3009 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 MUC2-202ENST00000613187 4845 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 OR4K15-201ENST00000305051 1216 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 SNORD65-201ENST00000391079 73 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 GSTA12P-201ENST00000402398 508 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 RPEP3-201ENST00000425462 676 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC013262.1-201ENST00000426710 252 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 RPL23AP23-201ENST00000452590 471 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 DAP3-209ENST00000465375 729 ntTSL 2 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC096741.1-201ENST00000472250 846 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC104763.1-201ENST00000475274 360 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC023424.1-201ENST00000496058 459 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 PPM1AP1-201ENST00000502740 1135 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 PRELID3BP6-201ENST00000503839 571 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC093720.1-201ENST00000505681 714 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 RNA5SP228-201ENST00000516232 133 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC090666.1-201ENST00000578241 445 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC130352.1-201ENST00000602979 661 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC104785.1-201ENST00000603220 588 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AP004372.1-201ENST00000604842 844 ntBASIC4.97□□□□□ -1.61
SIX4Q9UIU6 AC005021.1-201ENST00000608730 355 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms