Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 AC068254.2-201ENST00000623938 3577 ntBASIC4.14□□□□□ -1.75
VAPAQ9P0L0 FAM208A-202ENST00000431842 7119 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
VAPAQ9P0L0 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 AC011155.1-201ENST00000316512 456 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 MIR448-201ENST00000362131 111 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 RNA5SP502-201ENST00000362694 119 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 GCNT6-201ENST00000379591 934 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 MIR1178-201ENST00000408396 91 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 RN7SKP229-201ENST00000410465 302 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 BX510359.3-201ENST00000422168 306 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 RPL23AP4-201ENST00000427757 463 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 AC114495.1-201ENST00000441274 436 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 RN7SL629P-201ENST00000489622 285 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 AL133372.1-201ENST00000493565 745 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 PARP4P3-201ENST00000510265 317 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 OR8X1P-201ENST00000534542 869 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 AC008638.3-201ENST00000603341 463 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 MIR6729-201ENST00000618194 65 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 AC068870.2-201ENST00000620635 389 ntBASIC4.13□□□□□ -1.75
VAPAQ9P0L0 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
VAPAQ9P0L0 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 MAPK10-263ENST00000641052 4307 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC010132.2-201ENST00000295493 1043 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 RNA5SP397-201ENST00000391323 118 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 SNRPFP1-201ENST00000414761 252 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC099336.2-201ENST00000422457 254 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC008072.1-201ENST00000434254 824 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC099560.2-201ENST00000457554 255 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC004453.1-201ENST00000487895 408 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC108145.1-201ENST00000503770 153 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 UBE2Q2P10-201ENST00000514854 900 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 SNORD116-30-201ENST00000516468 85 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC090281.1-201ENST00000523019 276 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 OR5M7P-201ENST00000526140 972 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AP001781.1-201ENST00000530977 207 ntBASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.12□□□□□ -1.75
VAPAQ9P0L0 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms