Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 FRG2DP-202ENST00000566967 323 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 MIR3135A-201ENST00000578460 77 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC010327.4-201ENST00000585911 857 ntTSL 2 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC090236.2-201ENST00000587933 1101 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 HMGN1P30-201ENST00000589286 268 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AC092032.1-201ENST00000603090 165 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AL161734.1-201ENST00000609720 557 ntBASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 FZD3-204ENST00000537916 13740 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 UTP4-204ENST00000563094 4183 ntTSL 2 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CUEDC1Q9NWM3 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.84□□□□□ -1.32
CUEDC1Q9NWM3 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CUEDC1Q9NWM3 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC6.84□□□□□ -1.32
CUEDC1Q9NWM3 UIMC1-207ENST00000506128 1945 ntTSL 1 (best) BASIC6.84□□□□□ -1.32
CUEDC1Q9NWM3 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 ENTPD5-207ENST00000557325 3096 ntTSL 2 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 ZNF107-206ENST00000620827 5685 ntAPPRIS P4 TSL 4 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AL021877.2-201ENST00000624442 10684 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 UG0898H09-202ENST00000623646 7040 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 TMC3-AS1-206ENST00000612811 2726 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 Y_RNA.28-201ENST00000362554 111 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 MIR152-201ENST00000385212 87 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 MIR323B-201ENST00000385269 82 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AC087752.1-201ENST00000391360 558 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 RPL7P58-201ENST00000402913 758 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 RN7SKP232-201ENST00000410170 290 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 RBM6-203ENST00000421682 684 ntTSL 2 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 NPM1P34-201ENST00000428821 893 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AL121916.1-201ENST00000429405 308 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 RPL21P110-201ENST00000433345 446 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 UBE2V1P5-201ENST00000440070 405 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 LAPTM4BP1-201ENST00000447781 690 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AC104306.1-201ENST00000449702 371 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 RNU6-329P-201ENST00000459618 107 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 RPL10P7-201ENST00000495649 625 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 HMGB3P15-201ENST00000507326 574 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 MRPS35P2-201ENST00000508242 191 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 RNA5SP518-201ENST00000515957 119 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 IGKV2-36-201ENST00000519999 223 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AP000859.1-201ENST00000525536 307 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 DEFB131D-201ENST00000526803 184 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AL161670.1-201ENST00000554348 137 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 SCOCP1-201ENST00000554676 349 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AC011476.3-203ENST00000586961 346 ntTSL 5 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AC092960.1-201ENST00000604762 351 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 CASC19-232ENST00000641480 1244 ntBASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 PSG1-203ENST00000403380 1722 ntTSL 2 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.83□□□□□ -1.32
CUEDC1Q9NWM3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC012213.2-201ENST00000562917 4597 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC102941.1-201ENST00000567616 1537 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 AC096921.2-201ENST00000561507 1916 ntBASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 GART-204ENST00000381831 3490 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 FBXO7-202ENST00000397426 1888 ntTSL 2 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
CUEDC1Q9NWM3 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms