Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC131159.1-201ENST00000621854 213 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AL157770.1-201ENST00000623049 439 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC068137.4-201ENST00000638485 296 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 AC010266.2-201ENST00000564741 3255 ntBASIC5.98□□□□□ -1.45
VTA1Q9NP79 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VTA1Q9NP79 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
VTA1Q9NP79 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VTA1Q9NP79 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
VTA1Q9NP79 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC009962.1-201ENST00000567327 3813 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 RNASE9-201ENST00000338904 1049 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 OR5H2-201ENST00000355273 945 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 RN7SKP104-201ENST00000362605 328 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 U3.3-201ENST00000362986 216 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 RNU6-560P-201ENST00000364007 108 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 snoZ40.1-201ENST00000364540 72 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 Y_RNA.465-201ENST00000384293 102 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 RNU6-83P-201ENST00000384568 112 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 GAPDHP49-201ENST00000421421 961 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 REREP1Y-201ENST00000422655 198 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 MTND4P20-201ENST00000424125 869 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 COX7BP2-201ENST00000437976 242 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 REREP2Y-201ENST00000439103 200 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 DNAJC19P8-201ENST00000452887 259 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AL133244.1-201ENST00000456007 258 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC091951.3-201ENST00000504093 246 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC117522.2-201ENST00000510049 657 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC091912.1-201ENST00000511351 248 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 NDUFB4P12-201ENST00000513465 390 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC097486.1-201ENST00000515331 210 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 FABP5P12-201ENST00000515543 389 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC012400.1-201ENST00000518452 381 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 OR4A2P-201ENST00000527276 913 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AP001317.1-201ENST00000531194 960 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AADACP1-206ENST00000561502 1193 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AP001267.4-201ENST00000602598 545 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AP000238.1-201ENST00000608759 426 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC093799.2-201ENST00000610062 578 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AL603755.1-201ENST00000619504 163 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 uc_338.7-201ENST00000621834 124 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 OR8B1P-202ENST00000641132 1178 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 AC004158.1-201ENST00000564508 4319 ntBASIC5.97□□□□□ -1.45
VTA1Q9NP79 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
VTA1Q9NP79 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
VTA1Q9NP79 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.45
VTA1Q9NP79 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.96□□□□□ -1.45
VTA1Q9NP79 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
VTA1Q9NP79 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.96□□□□□ -1.45
VTA1Q9NP79 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
VTA1Q9NP79 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.96□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms