Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CASC19-222ENST00000641321 1173 ntBASIC4.95□□□□□ -1.62
PCDH9Q9HC56 AC106754.1-201ENST00000562632 1513 ntBASIC4.95□□□□□ -1.62
PCDH9Q9HC56 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH9Q9HC56 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH9Q9HC56 AL121950.1-201ENST00000624993 2077 ntBASIC4.95□□□□□ -1.62
PCDH9Q9HC56 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PCDH9Q9HC56 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 SNORA51.8-201ENST00000384234 132 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 RNU6-796P-201ENST00000391086 107 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 SNORA68.2-201ENST00000391263 128 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 RN7SKP247-201ENST00000411094 308 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 OR13Z1P-201ENST00000416141 834 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 OR2AM1P-201ENST00000422137 422 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 FABP7P1-201ENST00000424004 391 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 MTCO2P17-201ENST00000424336 677 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 RPS17P8-201ENST00000434525 335 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC093414.1-201ENST00000434712 514 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 Z80107.1-201ENST00000436830 412 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC092691.2-201ENST00000461787 803 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 SETP6-201ENST00000479329 568 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 RPL32P9-201ENST00000487963 407 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 BTF3P13-201ENST00000513224 490 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AP003066.2-201ENST00000529375 555 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 GCSHP4-201ENST00000538792 439 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 FKBP1BP1-201ENST00000553366 325 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC051619.2-201ENST00000559063 397 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC091057.3-201ENST00000602684 733 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AL121932.1-201ENST00000605542 214 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC092159.4-201ENST00000624944 550 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 MAPK10-320ENST00000641462 6696 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 AC131971.1-201ENST00000332881 1482 ntBASIC4.94□□□□□ -1.62
PCDH9Q9HC56 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.94□□□□□ -1.62
PCDH9Q9HC56 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 ZNF90P1-201ENST00000480493 1951 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 RNU6-481P-201ENST00000384194 107 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 RNU6-1257P-201ENST00000384625 110 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 HMGB3P7-201ENST00000400214 611 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AL109941.1-201ENST00000401925 229 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 RPL7P57-201ENST00000423238 740 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 NDUFA5P10-201ENST00000432147 357 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 MIR99AHG-205ENST00000435697 716 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AL138787.1-202ENST00000437804 898 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 SLC25A18P1-201ENST00000449385 454 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 RPS3AP53-201ENST00000454716 778 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 RPL23AP56-201ENST00000460778 453 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 CYCSP20-201ENST00000473154 315 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AC093270.2-201ENST00000486157 792 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 RN7SL346P-201ENST00000491561 294 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 NDUFA5P12-201ENST00000503796 343 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 IRF5P1-201ENST00000504852 2164 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 NDUFB5P1-201ENST00000508134 564 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 BUD31P1-201ENST00000521828 359 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AC087894.1-201ENST00000538359 518 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 FAM106CP-201ENST00000582212 507 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 CBX3P2-202ENST00000583365 535 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AC023762.1-201ENST00000603280 584 ntBASIC4.93□□□□□ -1.62
PCDH9Q9HC56 AC020910.3-201ENST00000603701 874 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms