Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
BCAS3Q9H6U6 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
BCAS3Q9H6U6 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BCAS3Q9H6U6 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.14□□□□□ -1.43
BCAS3Q9H6U6 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
BCAS3Q9H6U6 MRRFP1-201ENST00000435941 1675 ntBASIC6.14□□□□□ -1.43
BCAS3Q9H6U6 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 U8.4-201ENST00000363626 134 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 RNU1-43P-201ENST00000365052 165 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 RNU6-1200P-201ENST00000384162 107 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC136624.1-201ENST00000400791 413 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 RNU6-920P-201ENST00000410926 92 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 PGBD4P8-201ENST00000412993 562 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 RNGTTP1-201ENST00000420965 728 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 Z99497.1-201ENST00000421282 135 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 GSTM5P1-201ENST00000434751 660 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 MTND3P1-201ENST00000441336 220 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AL591503.2-201ENST00000442314 1005 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 CDC42P1-201ENST00000456658 548 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 EIF4A2P4-201ENST00000458691 1196 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC091965.2-201ENST00000512324 613 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 snoZ278.1-201ENST00000517059 112 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 DUXAP2-201ENST00000519198 589 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC106038.2-201ENST00000520706 568 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 PMS2P3-207ENST00000529061 717 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 NMNAT1P5-201ENST00000559657 841 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC011260.1-201ENST00000578420 472 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 IGLCOR22-2-201ENST00000605398 313 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC012409.3-201ENST00000611343 981 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC024941.1-201ENST00000612250 334 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC025253.1-201ENST00000613623 543 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC015712.7-201ENST00000615211 635 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 MIR7155-201ENST00000615925 56 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 CYP4F35P-202ENST00000636121 390 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC073544.1-201ENST00000600110 1595 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AC000367.1-201ENST00000452711 1766 ntBASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
BCAS3Q9H6U6 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC005294.1-201ENST00000355509 281 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 RNU4-21P-201ENST00000362802 126 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 RNU1-106P-201ENST00000384382 164 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 ZNF603P-201ENST00000405613 487 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 MTND1P21-201ENST00000412991 285 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 CNOT7P1-201ENST00000429006 852 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AL590103.1-201ENST00000434488 307 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 FGF7P6-202ENST00000451282 293 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 RNU7-140P-201ENST00000459546 60 ntBASIC6.12□□□□□ -1.43
BCAS3Q9H6U6 GAPDHP36-201ENST00000480688 918 ntBASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms