Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 RNU1-130P-201ENST00000363930 160 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 SNORD113.2-201ENST00000364166 89 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 SDHCP2-201ENST00000398565 501 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 SNORA74C-2-201ENST00000411179 201 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 FTH1P16-201ENST00000435241 552 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 MAPRE1P3-201ENST00000435438 796 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 ARL2BPP10-201ENST00000446487 531 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AC010618.1-201ENST00000469924 477 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AC022795.1-201ENST00000473808 480 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AC005191.1-201ENST00000603950 358 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AC100847.1-201ENST00000611316 481 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AC024941.1-201ENST00000612250 334 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 AL049536.1-201ENST00000625043 744 ntBASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
UPF3BQ9BZI7 THAP12P8-201ENST00000447914 2115 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 MIR1911-201ENST00000410783 80 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 ELOCP19-201ENST00000411919 318 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AL592293.2-201ENST00000422292 996 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC079804.1-201ENST00000461922 436 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC112184.1-201ENST00000505179 312 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 STMN1P2-201ENST00000508435 439 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 RNA5SP497-201ENST00000516081 97 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AL133243.1-201ENST00000614487 366 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 MIR7154-201ENST00000620673 73 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC006840.1-201ENST00000623069 542 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 AC009951.1-201ENST00000623674 2614 ntBASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
UPF3BQ9BZI7 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 FAM3C2-201ENST00000312214 681 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 RNU4-39P-201ENST00000362455 127 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 AC233289.1-201ENST00000403700 508 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 RNU4-25P-201ENST00000410569 230 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 UQCRBP1-201ENST00000421129 336 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 RPL12P34-201ENST00000424532 479 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 RPEP3-201ENST00000425462 676 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 AC013356.1-201ENST00000489027 564 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 RNA5SP360-201ENST00000516555 118 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 NPM1P6-201ENST00000521088 871 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 AL358913.1-201ENST00000554342 121 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 MEG8-217ENST00000556637 924 ntTSL 5 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 VN1R85P-201ENST00000601587 426 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 AP001005.3-201ENST00000622049 129 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 MTCO1P22-201ENST00000604619 1360 ntBASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC5.23□□□□□ -1.57
UPF3BQ9BZI7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms