Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 MIR298-201ENST00000401212 88 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC009480.2-201ENST00000422916 432 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 MTND2P5-201ENST00000432656 1006 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 NRBF2P3-201ENST00000432731 865 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC005154.2-201ENST00000438110 379 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC016772.1-201ENST00000444170 1261 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC023271.1-201ENST00000445936 1090 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AL935212.3-201ENST00000450729 284 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC234781.3-201ENST00000452540 973 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 SNORD11.1-201ENST00000459482 85 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC103987.1-201ENST00000473394 348 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC008565.1-201ENST00000509046 885 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC008700.1-201ENST00000512571 654 ntTSL 3 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AP001880.2-201ENST00000538233 448 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 SULT1C2P2-201ENST00000562517 294 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 CYP2C60P-201ENST00000566088 139 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AC019322.1-201ENST00000571869 389 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AL157392.4-201ENST00000609756 345 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 uc_338.9-201ENST00000617424 182 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 AL035461.2-201ENST00000619201 524 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 CR381572.2-201ENST00000624852 397 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 MTCO1P6-201ENST00000481192 1384 ntBASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RTFDC1Q9BY42 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 RNU6-1339P-201ENST00000363574 91 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 SNORA2.3-201ENST00000383920 135 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 SNORA70.6-201ENST00000383934 134 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 RNU6-98P-201ENST00000384173 107 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 NANOGP5-201ENST00000424456 877 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 HSPA8P17-201ENST00000427029 1382 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 RPL7AP49-201ENST00000429522 581 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 CCNB1IP1P2-201ENST00000432876 818 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AL591438.1-201ENST00000433508 581 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC068135.1-201ENST00000446164 246 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 SLC25A18P1-201ENST00000449385 454 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 IGBP1P5-201ENST00000507524 1000 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 PRELID3BP4-201ENST00000515476 571 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 RN7SKP276-201ENST00000516242 268 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 RNA5SP392-201ENST00000516905 112 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 OR8I1P-201ENST00000529291 931 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC124293.1-201ENST00000530034 493 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 DHX40P1-201ENST00000588725 1412 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC002069.2-201ENST00000603580 883 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AL160237.3-201ENST00000604114 1013 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AC007786.3-201ENST00000615154 596 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 U6.48-201ENST00000618523 106 ntBASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 LGI1-209ENST00000627699 664 ntTSL 3 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTFDC1Q9BY42 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RTFDC1Q9BY42 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTFDC1Q9BY42 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms