Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
RSPO3Q9BXY4 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
RSPO3Q9BXY4 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 SNORA71.2-201ENST00000364941 134 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 RNU6-398P-201ENST00000384143 109 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 MIR3065-201ENST00000390137 79 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 RPS16P5-201ENST00000406501 404 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 EIF4A1P3-201ENST00000411521 244 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AC006065.1-201ENST00000422539 802 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 C4BPAP2-201ENST00000428434 478 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 DNAJC19P7-201ENST00000428811 344 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 RPL23AP25-201ENST00000430973 463 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 RPL7P22-201ENST00000466005 733 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 RN7SL809P-201ENST00000482040 297 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 HMGB3P14-201ENST00000494195 599 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 KRTAP5-14P-201ENST00000502328 121 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AC069240.1-201ENST00000548774 375 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AL121834.1-201ENST00000572284 509 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AC064801.1-201ENST00000612025 407 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 SNX18P1Y-201ENST00000616231 511 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 DHX40P1-201ENST00000588725 1412 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 MMP16-201ENST00000286614 11558 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AC092435.4-201ENST00000623012 4159 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 AC091046.3-201ENST00000631455 1574 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 Z98755.1-201ENST00000407015 1384 ntBASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
RSPO3Q9BXY4 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 CR382285.2-201ENST00000624662 1495 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 MIR513A2-201ENST00000385249 127 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 MIR298-201ENST00000401212 88 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC019050.1-201ENST00000418508 492 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 UQCRBP1-201ENST00000421129 336 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 EIF4EP1-201ENST00000422311 642 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC073335.1-201ENST00000427776 363 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 RPL23AP1-201ENST00000428990 471 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 PRELID3BP10-201ENST00000431957 584 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC009963.2-201ENST00000453431 138 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC006967.1-201ENST00000467608 589 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 RPL21P126-201ENST00000470049 478 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC104164.2-201ENST00000496953 495 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC108145.1-201ENST00000503770 153 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 NPM1P6-201ENST00000521088 871 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 PHBP17-201ENST00000528576 541 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 TRAV8-5-201ENST00000537369 341 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 DYNLL1P4-201ENST00000549314 266 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 MIR5096-201ENST00000583713 70 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AL133243.1-201ENST00000614487 366 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC008013.2-202ENST00000637965 364 ntBASIC4.01□□□□□ -1.77
RSPO3Q9BXY4 AC138627.1-204ENST00000641894 765 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms