Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AL157770.1-201ENST00000623049 439 ntBASIC5.46□□□□□ -1.54
SMOQ99835 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.46□□□□□ -1.54
SMOQ99835 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC5.46□□□□□ -1.54
SMOQ99835 AC053481.2-202ENST00000582394 1500 ntBASIC5.46□□□□□ -1.54
SMOQ99835 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMOQ99835 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SMOQ99835 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMOQ99835 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMOQ99835 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SMOQ99835 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SMOQ99835 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.46□□□□□ -1.54
SMOQ99835 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SMOQ99835 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.46□□□□□ -1.54
SMOQ99835 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.45□□□□□ -1.54
SMOQ99835 AC006042.3-201ENST00000454684 1469 ntBASIC5.45□□□□□ -1.54
SMOQ99835 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SMOQ99835 CASC19-260ENST00000641828 2001 ntBASIC5.45□□□□□ -1.54
SMOQ99835 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 SNURFL-201ENST00000309296 343 ntBASIC5.45□□□□□ -1.54
SMOQ99835 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC5.45□□□□□ -1.54
SMOQ99835 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SMOQ99835 AL645927.1-201ENST00000396783 406 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AL079342.2-201ENST00000403367 482 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AP000357.1-201ENST00000409926 1165 ntBASIC5.45□□□□□ -1.54
SMOQ99835 RN7SKP182-201ENST00000410772 298 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.45□□□□□ -1.54
SMOQ99835 PTP4A1P1-201ENST00000420539 515 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC007394.1-201ENST00000421941 531 ntBASIC5.45□□□□□ -1.54
SMOQ99835 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC5.45□□□□□ -1.54
SMOQ99835 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC5.45□□□□□ -1.54
SMOQ99835 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.45□□□□□ -1.54
SMOQ99835 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.45□□□□□ -1.54
SMOQ99835 HSD52-202ENST00000436225 772 ntTSL 3 BASIC5.45□□□□□ -1.54
SMOQ99835 PSMD10P3-201ENST00000437000 448 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC092393.1-201ENST00000439625 742 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC5.45□□□□□ -1.54
SMOQ99835 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 AC005002.1-201ENST00000447458 540 ntBASIC5.45□□□□□ -1.54
SMOQ99835 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.45□□□□□ -1.54
SMOQ99835 AC097484.1-201ENST00000471148 389 ntBASIC5.45□□□□□ -1.54
SMOQ99835 RPL7AP6-201ENST00000477943 801 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC093270.2-201ENST00000486157 792 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC109462.1-201ENST00000491087 368 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC084024.2-201ENST00000503480 791 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC113347.3-201ENST00000509113 148 ntBASIC5.45□□□□□ -1.54
SMOQ99835 E2F5-204ENST00000517476 1094 ntTSL 2 BASIC5.45□□□□□ -1.54
SMOQ99835 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.45□□□□□ -1.54
SMOQ99835 AP003461.1-201ENST00000528866 78 ntBASIC5.45□□□□□ -1.54
SMOQ99835 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.45□□□□□ -1.54
SMOQ99835 AC090888.1-201ENST00000561335 1141 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.45□□□□□ -1.54
SMOQ99835 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC5.45□□□□□ -1.54
SMOQ99835 AC087763.1-201ENST00000603391 286 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC021749.1-201ENST00000604322 607 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC009163.6-201ENST00000612367 342 ntBASIC5.45□□□□□ -1.54
SMOQ99835 AC107075.1-201ENST00000613695 314 ntBASIC5.45□□□□□ -1.54
SMOQ99835 OR8G7P-201ENST00000616658 848 ntBASIC5.45□□□□□ -1.54
SMOQ99835 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC5.45□□□□□ -1.54
SMOQ99835 Z95114.1-201ENST00000624264 14574 ntBASIC5.45□□□□□ -1.54
SMOQ99835 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.45□□□□□ -1.54
SMOQ99835 UGT2B26P-201ENST00000508672 1613 ntBASIC5.45□□□□□ -1.54
SMOQ99835 SEC63P2-201ENST00000503863 1939 ntBASIC5.44□□□□□ -1.54
SMOQ99835 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMOQ99835 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
SMOQ99835 CCT8P1-201ENST00000413611 1657 ntBASIC5.44□□□□□ -1.54
SMOQ99835 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
SMOQ99835 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SMOQ99835 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.44□□□□□ -1.54
SMOQ99835 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SMOQ99835 NACA3P-201ENST00000359690 648 ntBASIC5.44□□□□□ -1.54
SMOQ99835 SNORA58B-201ENST00000364259 136 ntBASIC5.44□□□□□ -1.54
SMOQ99835 RNU6-185P-201ENST00000384421 107 ntBASIC5.44□□□□□ -1.54
SMOQ99835 SNORA48.4-201ENST00000391089 134 ntBASIC5.44□□□□□ -1.54
SMOQ99835 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC5.44□□□□□ -1.54
SMOQ99835 TCEA1P4-201ENST00000415066 844 ntBASIC5.44□□□□□ -1.54
SMOQ99835 TRGV6-201ENST00000417928 299 ntBASIC5.44□□□□□ -1.54
SMOQ99835 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC5.44□□□□□ -1.54
SMOQ99835 HNRNPA1P29-201ENST00000426409 879 ntBASIC5.44□□□□□ -1.54
SMOQ99835 RPS27AP6-201ENST00000427962 448 ntBASIC5.44□□□□□ -1.54
SMOQ99835 AL390023.1-201ENST00000428836 262 ntBASIC5.44□□□□□ -1.54
SMOQ99835 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.44□□□□□ -1.54
SMOQ99835 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.44□□□□□ -1.54
SMOQ99835 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.44□□□□□ -1.54
SMOQ99835 ARL5AP2-201ENST00000444698 533 ntBASIC5.44□□□□□ -1.54
SMOQ99835 AC073850.1-201ENST00000449243 255 ntBASIC5.44□□□□□ -1.54
SMOQ99835 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC5.44□□□□□ -1.54
SMOQ99835 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.44□□□□□ -1.54
SMOQ99835 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 140.8 ms