Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 AC023575.1-201ENST00000580510 358 ntBASIC6.19□□□□□ -1.42
SIN3AQ96ST3 RN7SL600P-201ENST00000581811 299 ntBASIC6.19□□□□□ -1.42
SIN3AQ96ST3 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 SMCR2_2.1-201ENST00000619783 161 ntBASIC6.19□□□□□ -1.42
SIN3AQ96ST3 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
SIN3AQ96ST3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 RN7SKP199-201ENST00000410325 305 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC009237.10-201ENST00000414112 510 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC017078.1-201ENST00000416146 368 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 MAPRE1P3-201ENST00000435438 796 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 ARL4AP3-201ENST00000441452 574 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 OR52Y1P-201ENST00000452418 828 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 RPL23AP81-201ENST00000455252 467 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC010618.1-201ENST00000469924 477 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC109327.1-201ENST00000471666 403 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC090589.1-201ENST00000473109 362 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC105137.1-201ENST00000484355 562 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC108475.1-201ENST00000507880 950 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC106806.2-201ENST00000509365 500 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 PHBP17-201ENST00000528576 541 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC025423.2-201ENST00000537570 439 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 EIF4A2P1-201ENST00000587313 1063 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 MIR3653-201ENST00000625572 110 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 AL589740.1-204ENST00000634677 630 ntTSL 4 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 MIR6830-201ENST00000636015 70 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 CASC19-255ENST00000641733 1385 ntBASIC6.18□□□□□ -1.42
SIN3AQ96ST3 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC6.18□□□□□ -1.42
SIN3AQ96ST3 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 CP-201ENST00000264613 4676 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 RNU1-15P-201ENST00000353977 144 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 RPS27AP11-201ENST00000402798 447 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 C4BPAP2-201ENST00000428434 478 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 AC010374.1-201ENST00000503762 1237 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 OR7E10P-201ENST00000526420 991 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 AC016839.1-201ENST00000578162 867 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 OOSP1P2-201ENST00000579644 351 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 AL590392.1-201ENST00000604960 446 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 KATNBL1P1-201ENST00000605192 748 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 AL023881.1-201ENST00000621088 301 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 AC103798.2-201ENST00000624292 632 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 PCAT14-202ENST00000627127 3935 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 AL031595.2-201ENST00000624215 19071 ntBASIC6.17□□□□□ -1.42
SIN3AQ96ST3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
SIN3AQ96ST3 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
SIN3AQ96ST3 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SIN3AQ96ST3 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SIN3AQ96ST3 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SIN3AQ96ST3 FTO-203ENST00000460382 1517 ntTSL 5 BASIC6.16□□□□□ -1.42
SIN3AQ96ST3 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
SIN3AQ96ST3 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.16□□□□□ -1.42
SIN3AQ96ST3 OR6C69P-201ENST00000394268 893 ntBASIC6.16□□□□□ -1.42
SIN3AQ96ST3 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC6.16□□□□□ -1.42
SIN3AQ96ST3 REREP1Y-201ENST00000422655 198 ntBASIC6.16□□□□□ -1.42
SIN3AQ96ST3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.16□□□□□ -1.42
SIN3AQ96ST3 CEACAMP1-201ENST00000434624 1035 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms