Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 AC147055.3-201ENST00000510547 851 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 MAL2-205ENST00000521048 575 ntTSL 4 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC008562.1-201ENST00000521763 330 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 OR4A46P-201ENST00000527255 933 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 HMGN2P6-201ENST00000551091 273 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VMP1Q96GC9 RN7SL708P-201ENST00000580952 299 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AP000919.1-202ENST00000581139 1264 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 RNF138P2-201ENST00000603490 592 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC008814.1-201ENST00000603797 406 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 FRG1DP-201ENST00000635586 771 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
VMP1Q96GC9 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VMP1Q96GC9 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
VMP1Q96GC9 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VMP1Q96GC9 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
VMP1Q96GC9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VMP1Q96GC9 AC012020.1-201ENST00000624541 1728 ntBASIC4.86□□□□□ -1.63
VMP1Q96GC9 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
VMP1Q96GC9 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VMP1Q96GC9 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VMP1Q96GC9 SNORA70-201ENST00000384436 135 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 MIR589-201ENST00000385238 99 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 RN7SKP199-201ENST00000410325 305 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 DPPA2P3-201ENST00000411853 655 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC023128.2-201ENST00000420880 1223 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 MORF4L1P7-201ENST00000426038 703 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 RPS7P5-201ENST00000441482 581 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 FGF7P3-201ENST00000454645 303 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 RPSAP50-201ENST00000481955 852 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC110792.2-201ENST00000510278 224 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC051619.2-201ENST00000559063 397 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 LINC00557-201ENST00000563184 1279 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC010680.4-201ENST00000605334 543 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 MIR8069-1-201ENST00000616627 86 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 MIR8069-2-201ENST00000621412 86 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 MIR6719-201ENST00000622428 87 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 U6.107-201ENST00000637108 79 ntBASIC4.85□□□□□ -1.63
VMP1Q96GC9 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
VMP1Q96GC9 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VMP1Q96GC9 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
VMP1Q96GC9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.85□□□□□ -1.63
VMP1Q96GC9 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
VMP1Q96GC9 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
VMP1Q96GC9 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC025125.1-201ENST00000624743 1922 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
VMP1Q96GC9 RNA5SP391-201ENST00000363456 119 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 OR52E6-202ENST00000379946 954 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 MIR765-201ENST00000390226 114 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 MIR1182-201ENST00000408363 97 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 RPL23AP27-201ENST00000415161 451 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC114814.2-201ENST00000419195 485 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 BRWD1P3-201ENST00000428816 390 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 GAPDHP58-201ENST00000438477 1006 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 BTBD7P2-201ENST00000441962 620 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC112206.1-201ENST00000468416 477 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC109462.1-201ENST00000491087 368 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC073358.1-201ENST00000505671 684 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 SETP12-201ENST00000514068 805 ntBASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.84□□□□□ -1.63
VMP1Q96GC9 AC092490.3-201ENST00000545370 572 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms