Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 ZDHHC20P2-201ENST00000424108 429 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 RIMKLBP2-201ENST00000424737 654 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 RPS4XP16-201ENST00000427198 791 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 VDAC1P6-201ENST00000430062 855 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 VN1R32P-201ENST00000452234 905 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC244505.3-201ENST00000454598 187 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 MTND1P5-201ENST00000517906 940 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 MTCO1P49-201ENST00000523429 802 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC122688.1-201ENST00000541494 223 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 RNASE9-206ENST00000554964 1101 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC012213.3-201ENST00000577199 777 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC012254.4-201ENST00000588843 273 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AP002906.1-201ENST00000603405 233 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC245297.2-201ENST00000610119 565 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC024257.5-201ENST00000612739 531 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AL158163.2-201ENST00000619110 700 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AP000346.3-201ENST00000622821 210 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC073530.2-201ENST00000623987 261 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC007490.1-201ENST00000624321 703 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC006927.3-201ENST00000638789 384 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AC073869.10-201ENST00000642016 354 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 AL133268.1-201ENST00000405676 1401 ntBASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.45□□□□□ -1.54
SLC44A3Q8N4M1 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 SAMM50P1-201ENST00000455403 1399 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 MTND4P34-201ENST00000572715 1371 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 HSPD1P7-201ENST00000447985 1686 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AL442128.2-201ENST00000620246 1824 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 ANKRD36P1-201ENST00000344424 659 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 RN7SKP95-201ENST00000362860 303 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 U3.3-201ENST00000362986 216 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 RNU1-146P-201ENST00000364015 165 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 RNU6-224P-201ENST00000384055 107 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 Y_RNA.578-201ENST00000390903 88 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 SNORD65-201ENST00000391079 73 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AL355379.1-201ENST00000405542 640 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AL356967.1-201ENST00000406305 431 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 NACAP7-201ENST00000407371 609 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 SNORA11-201ENST00000408789 128 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 CHEK2P3-201ENST00000416118 248 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 OFD1P11Y-201ENST00000418213 1177 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 COX6CP17-201ENST00000421389 185 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 NPM1P33-201ENST00000438918 872 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 FGF7P5-201ENST00000441829 291 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AL133477.1-201ENST00000457472 514 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC092754.2-201ENST00000463506 460 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC090602.1-201ENST00000469695 252 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 RPL23AP44-201ENST00000482216 473 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC012123.2-201ENST00000485809 248 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 HMGN2P25-201ENST00000486956 268 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC021146.7-201ENST00000509604 775 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC093755.1-201ENST00000512950 1023 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 OR7H2P-201ENST00000513483 306 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC097486.1-201ENST00000515331 210 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 AC021006.3-201ENST00000530771 192 ntBASIC5.44□□□□□ -1.54
SLC44A3Q8N4M1 PDCL2P2-201ENST00000533651 189 ntBASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 273 ms