Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 SNORD8-201ENST00000363915 110 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 RN7SKP250-201ENST00000363924 321 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 Y_RNA.422-201ENST00000384054 114 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 MIR559-201ENST00000385188 96 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AL354719.1-201ENST00000406535 843 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 MIR1284-201ENST00000408337 120 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AL359704.1-201ENST00000411586 781 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 RPL24P2-201ENST00000421023 475 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AL353678.1-201ENST00000422735 741 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC007568.1-201ENST00000422912 471 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 NPM1P18-201ENST00000434232 732 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC002486.1-201ENST00000435098 391 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 CALM1P1-201ENST00000442082 433 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 GAPDHP17-201ENST00000449858 1001 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AL583843.1-201ENST00000456070 346 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC117394.1-201ENST00000477323 567 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 CCDC34P1-201ENST00000507441 517 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 ELOCP31-201ENST00000540463 467 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AL390334.1-201ENST00000556395 450 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC244034.2-201ENST00000562504 509 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC093249.1-201ENST00000567049 203 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 KPNA2P3-201ENST00000584190 848 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 LAPTM4BP2-201ENST00000604542 446 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC073046.2-201ENST00000604756 527 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 RNU6-88P-201ENST00000606801 100 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AL008723.3-201ENST00000608926 449 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 RMST_3.1-201ENST00000611651 109 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC090527.3-201ENST00000619041 548 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC006840.1-201ENST00000623069 542 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC139792.3-201ENST00000623525 224 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC093591.3-201ENST00000634516 308 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AC110994.2-201ENST00000635481 492 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 AL031985.3-201ENST00000565390 2449 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
ATG4DQ86TL0 MAPK10-261ENST00000641050 3109 ntBASIC5.81□□□□□ -1.48
ATG4DQ86TL0 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 BIN2P1-201ENST00000504996 1530 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC011504.1-201ENST00000623331 4103 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC010132.2-201ENST00000295493 1043 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 RNA5SP478-201ENST00000364657 115 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 RNU6-1263P-201ENST00000384601 106 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 RNU6-331P-201ENST00000384724 107 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC025750.1-201ENST00000399891 379 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 UBE2V1P14-201ENST00000415815 558 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 THEM7P-201ENST00000419556 672 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 SDCBPP2-201ENST00000424643 885 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AL365400.1-201ENST00000431854 640 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 RPL7P11-201ENST00000437586 658 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AL157827.1-201ENST00000447622 132 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC092967.1-201ENST00000449016 481 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 RANP1-206ENST00000455094 651 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC104339.1-201ENST00000465478 348 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC023598.1-201ENST00000472521 361 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 RN7SL413P-201ENST00000482700 297 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC093278.1-201ENST00000494700 600 ntBASIC5.8□□□□□ -1.48
ATG4DQ86TL0 THAP6-203ENST00000502620 582 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC5.8□□□□□ -1.48
ATG4DQ86TL0 RNY4P37-201ENST00000516225 96 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms