Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 MAP9-201ENST00000311277 7333 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS13CQ709C8 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS13CQ709C8 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS13CQ709C8 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS13CQ709C8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VPS13CQ709C8 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 AC079684.1-201ENST00000621405 437 ntBASIC3.34□□□□□ -1.87
VPS13CQ709C8 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VPS13CQ709C8 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
VPS13CQ709C8 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS13CQ709C8 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
VPS13CQ709C8 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC3.34□□□□□ -1.87
VPS13CQ709C8 AC083899.2-201ENST00000423285 1376 ntBASIC3.34□□□□□ -1.87
VPS13CQ709C8 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC3.34□□□□□ -1.88
VPS13CQ709C8 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.34□□□□□ -1.88
VPS13CQ709C8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.34□□□□□ -1.88
VPS13CQ709C8 CYCSP24-201ENST00000445119 316 ntBASIC3.34□□□□□ -1.88
VPS13CQ709C8 AC020893.1-201ENST00000502452 580 ntBASIC3.34□□□□□ -1.88
VPS13CQ709C8 MIR6852-201ENST00000621699 66 ntBASIC3.34□□□□□ -1.88
VPS13CQ709C8 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
VPS13CQ709C8 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.34□□□□□ -1.88
VPS13CQ709C8 NIPBL-201ENST00000282516 10435 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
VPS13CQ709C8 ZEB2-227ENST00000627532 9541 ntAPPRIS P2 TSL 1 (best) BASIC3.34□□□□□ -1.88
VPS13CQ709C8 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.88
VPS13CQ709C8 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 MIR1251-201ENST00000408552 70 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC079809.1-201ENST00000415468 276 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 TCEA1P2-201ENST00000420496 906 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 RPL5P24-201ENST00000463742 885 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 GTF2IP8-201ENST00000560687 584 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 RPL23AP97-201ENST00000568955 471 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC093671.1-201ENST00000624981 2929 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 AL133244.1-201ENST00000456007 258 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 AL049874.2-201ENST00000492636 288 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC006349.1-201ENST00000555526 235 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC124068.1-201ENST00000563131 678 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC005972.3-201ENST00000606304 481 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC107294.1-201ENST00000609524 467 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 CEP250-202ENST00000397527 15703 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 OR56B2P-201ENST00000317102 954 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 RPL23AP65-201ENST00000475608 468 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 WBP1LP4-201ENST00000505043 344 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 RNA5SP446-201ENST00000515955 82 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 RNA5SP179-201ENST00000517284 121 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 NPM1P47-201ENST00000560843 856 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 MIR4660-201ENST00000583549 74 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 AC064801.1-201ENST00000612025 407 ntBASIC3.33□□□□□ -1.88
VPS13CQ709C8 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC3.33□□□□□ -1.88
VPS13CQ709C8 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC3.33□□□□□ -1.88
VPS13CQ709C8 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AL031121.1-201ENST00000406553 254 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC106707.2-201ENST00000484182 374 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
VPS13CQ709C8 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 HMGB3P19-201ENST00000403971 560 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 CBX1P3-201ENST00000413296 527 ntBASIC3.32□□□□□ -1.88
VPS13CQ709C8 LINC00382-201ENST00000427918 890 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
VPS13CQ709C8 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms