Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 ANAPC1P1-201ENST00000426186 2145 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 SNORA11F-201ENST00000408237 128 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 GLS-203ENST00000409215 632 ntTSL 4 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 SNORA74C-2-201ENST00000411179 201 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 MTND2P15-201ENST00000418575 892 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AC062016.2-201ENST00000420950 676 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 PHBP16-201ENST00000446318 950 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 ZNF736P6Y-201ENST00000447526 1213 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 VN1R48P-201ENST00000448149 1036 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 RPL7P32-201ENST00000457119 744 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AL445433.1-201ENST00000457507 257 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AC010618.1-201ENST00000469924 477 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AC093267.1-201ENST00000489176 961 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 TRAV8-5-201ENST00000537369 341 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 MTND2P17-201ENST00000550281 688 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 MIR4675-201ENST00000577898 77 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AC023575.1-201ENST00000580510 358 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AC091178.1-203ENST00000584586 279 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 IMMP1LP1-201ENST00000605170 488 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 COX6CP4-201ENST00000605798 228 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AC114781.5-201ENST00000615297 108 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AC097372.4-201ENST00000625025 466 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AC006971.1-201ENST00000407916 4486 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 CROT-204ENST00000442291 1993 ntTSL 5 BASIC5.39□□□□□ -1.55
PDS5AQ29RF7 PCAT14-202ENST00000627127 3935 ntBASIC5.39□□□□□ -1.55
PDS5AQ29RF7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AP001002.1-201ENST00000625148 1513 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AL929601.4-201ENST00000613011 1341 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 RNA5SP366-201ENST00000365454 123 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 RNA5SP151-201ENST00000365632 117 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC073464.3-201ENST00000422564 712 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 ELOCP6-201ENST00000429066 328 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 UBE2V1P6-201ENST00000430840 422 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 GXYLT1P1-201ENST00000446657 490 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 ELOCP12-201ENST00000458706 328 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC112206.1-201ENST00000468416 477 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC104629.1-201ENST00000494226 508 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 PSMB7P1-201ENST00000556349 514 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC069366.1-201ENST00000583159 838 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 DNAJC19P3-201ENST00000594491 331 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC140479.6-201ENST00000633535 357 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC073869.7-201ENST00000640874 297 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 CUL4AP1-201ENST00000514750 1863 ntBASIC5.38□□□□□ -1.55
PDS5AQ29RF7 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PDS5AQ29RF7 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC5.37□□□□□ -1.55
PDS5AQ29RF7 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.37□□□□□ -1.55
PDS5AQ29RF7 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC5.37□□□□□ -1.55
PDS5AQ29RF7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDS5AQ29RF7 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDS5AQ29RF7 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
PDS5AQ29RF7 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDS5AQ29RF7 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC5.37□□□□□ -1.55
PDS5AQ29RF7 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PDS5AQ29RF7 SNORA27.3-201ENST00000364937 134 ntBASIC5.37□□□□□ -1.55
PDS5AQ29RF7 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
PDS5AQ29RF7 ST13P16-201ENST00000401760 781 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms