Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
PCDH1Q08174 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH1Q08174 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.3□□□□□ -1.4
PCDH1Q08174 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.3□□□□□ -1.4
PCDH1Q08174 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.3□□□□□ -1.4
PCDH1Q08174 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH1Q08174 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
PCDH1Q08174 TNPO1P2-201ENST00000426249 2665 ntBASIC6.3□□□□□ -1.4
PCDH1Q08174 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.3□□□□□ -1.4
PCDH1Q08174 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
PCDH1Q08174 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDH1Q08174 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDH1Q08174 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDH1Q08174 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
PCDH1Q08174 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDH1Q08174 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDH1Q08174 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
PCDH1Q08174 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 RNU6-878P-201ENST00000384578 110 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 SDHC-203ENST00000392169 369 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 AL049693.1-201ENST00000402760 611 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 JKAMPP1-201ENST00000413804 919 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH1Q08174 NANOGP6-201ENST00000429190 847 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 COL11A2P1-205ENST00000441798 676 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 PA2G4P1-201ENST00000442248 1197 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDH1Q08174 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH1Q08174 MTCO1P27-201ENST00000448269 226 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDH1Q08174 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AC119744.1-201ENST00000454746 1715 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AL133351.3-201ENST00000454998 193 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH1Q08174 RPSAP24-201ENST00000461543 873 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 RN7SL655P-201ENST00000486087 298 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AC097501.1-202ENST00000514707 313 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH1Q08174 IGLVVII-41-1-201ENST00000518405 151 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 COX6B1P4-201ENST00000519826 484 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 TPM3P3-201ENST00000521343 354 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 IGLVVI-25-1-201ENST00000521893 249 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AP003122.4-201ENST00000530980 758 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC073916.1-201ENST00000545095 130 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AL845331.3-202ENST00000562856 261 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC007496.2-201ENST00000564801 547 ntTSL 4 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AC011840.5-201ENST00000582125 771 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AP001180.3-201ENST00000582221 145 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 H3F3BP2-201ENST00000583907 357 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC022432.1-201ENST00000595739 310 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC104785.1-201ENST00000603220 588 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC245014.2-201ENST00000603689 287 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC246785.4-201ENST00000605374 287 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC055876.5-201ENST00000605667 259 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AC243773.3-201ENST00000613270 256 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 Xist_exon4.1-201ENST00000615964 126 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC139792.3-201ENST00000623525 224 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC129778.1-202ENST00000623812 261 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.29□□□□□ -1.4
PCDH1Q08174 AL591379.1-207ENST00000635982 261 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.29□□□□□ -1.4
PCDH1Q08174 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 DDX18P4-201ENST00000511690 1966 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 TMCC1P1-201ENST00000518897 1980 ntBASIC6.29□□□□□ -1.4
PCDH1Q08174 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDH1Q08174 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.29□□□□□ -1.4
PCDH1Q08174 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
PCDH1Q08174 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDH1Q08174 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDH1Q08174 SAMMSON-210ENST00000641260 1308 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDH1Q08174 AC003973.3-201ENST00000624863 2822 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.28□□□□□ -1.4
PCDH1Q08174 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC6.28□□□□□ -1.4
PCDH1Q08174 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 AC106038.1-201ENST00000501194 3473 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
PCDH1Q08174 AC073365.1-203ENST00000641055 1992 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 AC093225.1-201ENST00000506867 1408 ntBASIC6.28□□□□□ -1.4
PCDH1Q08174 ALB-219ENST00000621085 1418 ntTSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms