Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 AL161729.4-201ENST00000604650 476 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC008277.2-201ENST00000605196 797 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AL590282.1-201ENST00000610379 1136 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC131902.3-201ENST00000611767 581 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 MIR6862-1-201ENST00000613016 70 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 MIR6862-2-201ENST00000614755 70 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX4Q06945 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
SOX4Q06945 AC011447.7-201ENST00000624228 1590 ntBASIC6.47□□□□□ -1.37
SOX4Q06945 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 KIAA0040-206ENST00000619513 4340 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX4Q06945 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC6.47□□□□□ -1.37
SOX4Q06945 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC6.47□□□□□ -1.37
SOX4Q06945 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
SOX4Q06945 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.46□□□□□ -1.37
SOX4Q06945 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SOX4Q06945 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
SOX4Q06945 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SOX4Q06945 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SOX4Q06945 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
SOX4Q06945 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.46□□□□□ -1.37
SOX4Q06945 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC6.46□□□□□ -1.38
SOX4Q06945 OR4K15-201ENST00000305051 1216 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 SELENOWP1-201ENST00000322792 252 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 Y_RNA.89-201ENST00000363031 102 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 RNA5SP500-201ENST00000364486 119 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 RN7SKP78-201ENST00000364711 318 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 RNU6-534P-201ENST00000364877 106 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 Y_RNA.356-201ENST00000365475 113 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX4Q06945 AL031985.1-201ENST00000392713 418 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX4Q06945 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX4Q06945 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX4Q06945 RNU6-77P-201ENST00000410554 91 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX4Q06945 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX4Q06945 AC069157.1-201ENST00000421749 137 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC6.46□□□□□ -1.38
SOX4Q06945 AC007568.1-201ENST00000422912 471 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 MTND6P12-201ENST00000428247 522 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX4Q06945 MTCYBP45-201ENST00000435243 565 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 RPL23AP19-201ENST00000436229 369 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX4Q06945 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX4Q06945 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX4Q06945 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX4Q06945 AC007998.1-201ENST00000474156 672 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC6.46□□□□□ -1.38
SOX4Q06945 IL7R-204ENST00000506850 1004 ntTSL 2 BASIC6.46□□□□□ -1.38
SOX4Q06945 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX4Q06945 RNU6-416P-201ENST00000516265 103 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 PAICSP4-201ENST00000517543 1253 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 TBCA-203ENST00000517679 545 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX4Q06945 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC6.46□□□□□ -1.38
SOX4Q06945 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SOX4Q06945 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX4Q06945 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX4Q06945 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX4Q06945 AK6P1-201ENST00000540219 478 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 OR6C73P-201ENST00000546432 358 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX4Q06945 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC6.46□□□□□ -1.38
SOX4Q06945 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX4Q06945 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX4Q06945 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.46□□□□□ -1.38
SOX4Q06945 AL009028.1-201ENST00000604895 802 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 AL136131.3-201ENST00000607600 188 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 AC019193.2-201ENST00000610012 634 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
SOX4Q06945 AC135507.2-201ENST00000612443 309 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 uc_338.26-201ENST00000612659 160 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 AL445264.1-201ENST00000621719 171 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX4Q06945 AC112487.2-201ENST00000637950 304 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.46□□□□□ -1.38
SOX4Q06945 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
SOX4Q06945 SPATA2P1-201ENST00000431223 2055 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 AC027088.4-201ENST00000611559 1947 ntBASIC6.46□□□□□ -1.38
SOX4Q06945 SMAD5-211ENST00000545279 7012 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX4Q06945 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX4Q06945 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.46□□□□□ -1.38
SOX4Q06945 ZNF254-207ENST00000613065 4244 ntTSL 3 BASIC6.45□□□□□ -1.38
SOX4Q06945 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
SOX4Q06945 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC6.45□□□□□ -1.38
SOX4Q06945 AC022034.1-201ENST00000512867 2156 ntBASIC6.45□□□□□ -1.38
SOX4Q06945 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
SOX4Q06945 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms