Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC5.15□□□□□ -1.59
GABPAQ06546 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC5.15□□□□□ -1.59
GABPAQ06546 RPL7P50-201ENST00000600588 727 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 AC008966.2-201ENST00000606157 453 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 AL445363.3-201ENST00000623080 671 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 MIR492-201ENST00000638676 116 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
GABPAQ06546 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.59
GABPAQ06546 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC5.15□□□□□ -1.59
GABPAQ06546 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
GABPAQ06546 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
GABPAQ06546 AC097461.1-201ENST00000568928 2821 ntBASIC5.15□□□□□ -1.59
GABPAQ06546 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.14□□□□□ -1.59
GABPAQ06546 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
GABPAQ06546 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
GABPAQ06546 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABPAQ06546 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABPAQ06546 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.14□□□□□ -1.59
GABPAQ06546 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
GABPAQ06546 RNA5SP28-201ENST00000363841 119 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.14□□□□□ -1.59
GABPAQ06546 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.14□□□□□ -1.59
GABPAQ06546 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.14□□□□□ -1.59
GABPAQ06546 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.14□□□□□ -1.59
GABPAQ06546 SNRPFP2-201ENST00000440710 251 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC5.14□□□□□ -1.59
GABPAQ06546 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.14□□□□□ -1.59
GABPAQ06546 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GABPAQ06546 RN7SL812P-201ENST00000493791 279 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 ATG10-AS1-201ENST00000504846 648 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.14□□□□□ -1.59
GABPAQ06546 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.14□□□□□ -1.59
GABPAQ06546 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GABPAQ06546 RN7SL176P-201ENST00000580352 264 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
GABPAQ06546 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC5.14□□□□□ -1.59
GABPAQ06546 AL161729.3-201ENST00000603533 673 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 AC067959.1-201ENST00000604334 379 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 AC092653.1-201ENST00000608509 531 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 AL021997.2-201ENST00000615674 271 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 RNA5SP196-201ENST00000625967 102 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABPAQ06546 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.14□□□□□ -1.59
GABPAQ06546 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABPAQ06546 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
GABPAQ06546 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
GABPAQ06546 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.14□□□□□ -1.59
GABPAQ06546 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.14□□□□□ -1.59
GABPAQ06546 LARP1BP1-201ENST00000506036 1359 ntBASIC5.14□□□□□ -1.59
GABPAQ06546 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC5.14□□□□□ -1.59
GABPAQ06546 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.14□□□□□ -1.59
GABPAQ06546 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.14□□□□□ -1.59
GABPAQ06546 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
GABPAQ06546 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABPAQ06546 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
GABPAQ06546 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABPAQ06546 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
GABPAQ06546 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.13□□□□□ -1.59
GABPAQ06546 HSPD1P14-201ENST00000432666 1618 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GABPAQ06546 MIR383-201ENST00000362257 73 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 RNU6-819P-201ENST00000364116 107 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 ATP5F1P2-201ENST00000398143 760 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 RNA5SP317-201ENST00000410176 116 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 RNU6-564P-201ENST00000410983 104 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 RNA5SP311-201ENST00000411290 116 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.13□□□□□ -1.59
GABPAQ06546 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.13□□□□□ -1.59
GABPAQ06546 MFSD13B-201ENST00000420133 1290 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.13□□□□□ -1.59
GABPAQ06546 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.13□□□□□ -1.59
GABPAQ06546 BTF3P10-201ENST00000433415 495 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 OR4C10P-201ENST00000434991 931 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.13□□□□□ -1.59
GABPAQ06546 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GABPAQ06546 AL031584.1-201ENST00000447169 754 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 RPL31P53-201ENST00000457065 348 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 AC020898.1-201ENST00000474167 787 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
GABPAQ06546 AC091544.1-201ENST00000484702 348 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 RPS4XP18-201ENST00000495480 763 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 PARP4P3-201ENST00000510265 317 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.13□□□□□ -1.59
GABPAQ06546 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GABPAQ06546 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.13□□□□□ -1.59
GABPAQ06546 RNA5SP315-201ENST00000516340 116 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 RNA5SP312-201ENST00000517068 116 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.13□□□□□ -1.59
GABPAQ06546 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC5.13□□□□□ -1.59
GABPAQ06546 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC5.13□□□□□ -1.59
GABPAQ06546 RN7SL600P-201ENST00000581811 299 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.13□□□□□ -1.59
GABPAQ06546 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
GABPAQ06546 AC022387.2-201ENST00000604050 448 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 AL160290.3-201ENST00000604869 165 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 AC025175.1-201ENST00000606482 759 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.13□□□□□ -1.59
GABPAQ06546 AC234782.5-201ENST00000617723 324 ntBASIC5.13□□□□□ -1.59
GABPAQ06546 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms