Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.29□□□□□ -1.72
VSX2P58304 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.29□□□□□ -1.72
VSX2P58304 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
VSX2P58304 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.29□□□□□ -1.72
VSX2P58304 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.29□□□□□ -1.72
VSX2P58304 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
VSX2P58304 AC006065.6-201ENST00000625201 545 ntBASIC4.29□□□□□ -1.72
VSX2P58304 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.29□□□□□ -1.72
VSX2P58304 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VSX2P58304 MFSD8-242ENST00000641690 4199 ntBASIC4.29□□□□□ -1.72
VSX2P58304 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
VSX2P58304 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VSX2P58304 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
VSX2P58304 AC139769.1-204ENST00000472297 1931 ntBASIC4.29□□□□□ -1.72
VSX2P58304 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
VSX2P58304 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
VSX2P58304 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC4.28□□□□□ -1.72
VSX2P58304 NUCB2-220ENST00000622082 1369 ntAPPRIS P2 TSL 5 BASIC4.28□□□□□ -1.72
VSX2P58304 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VSX2P58304 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VSX2P58304 RNA5SP28-201ENST00000363841 119 ntBASIC4.28□□□□□ -1.72
VSX2P58304 RPS24P12-201ENST00000402084 394 ntBASIC4.28□□□□□ -1.72
VSX2P58304 ELOCP19-201ENST00000411919 318 ntBASIC4.28□□□□□ -1.72
VSX2P58304 TMSB10P2-201ENST00000416049 131 ntBASIC4.28□□□□□ -1.72
VSX2P58304 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.28□□□□□ -1.72
VSX2P58304 AL356387.2-201ENST00000422272 243 ntBASIC4.28□□□□□ -1.72
VSX2P58304 RPL18P10-201ENST00000425606 538 ntBASIC4.28□□□□□ -1.72
VSX2P58304 C4BPAP2-201ENST00000428434 478 ntBASIC4.28□□□□□ -1.72
VSX2P58304 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.28□□□□□ -1.72
VSX2P58304 AC011998.1-201ENST00000433403 117 ntBASIC4.28□□□□□ -1.72
VSX2P58304 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC4.28□□□□□ -1.72
VSX2P58304 ARL4AP3-201ENST00000441452 574 ntBASIC4.28□□□□□ -1.72
VSX2P58304 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.28□□□□□ -1.72
VSX2P58304 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.28□□□□□ -1.72
VSX2P58304 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.28□□□□□ -1.72
VSX2P58304 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC4.28□□□□□ -1.72
VSX2P58304 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VSX2P58304 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VSX2P58304 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.28□□□□□ -1.72
VSX2P58304 CCNHP1-201ENST00000513311 678 ntBASIC4.28□□□□□ -1.72
VSX2P58304 RNU4-18P-201ENST00000516751 149 ntBASIC4.28□□□□□ -1.72
VSX2P58304 AP000827.1-201ENST00000527814 258 ntBASIC4.28□□□□□ -1.72
VSX2P58304 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VSX2P58304 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
VSX2P58304 DYNLL1P4-201ENST00000549314 266 ntBASIC4.28□□□□□ -1.72
VSX2P58304 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
VSX2P58304 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.28□□□□□ -1.72
VSX2P58304 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC4.28□□□□□ -1.72
VSX2P58304 AP005901.4-201ENST00000577336 569 ntBASIC4.28□□□□□ -1.72
VSX2P58304 MIR4284-201ENST00000578924 81 ntBASIC4.28□□□□□ -1.72
VSX2P58304 MIR4697-201ENST00000582977 78 ntBASIC4.28□□□□□ -1.72
VSX2P58304 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.28□□□□□ -1.72
VSX2P58304 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.28□□□□□ -1.72
VSX2P58304 BPIFA4P-203ENST00000603168 689 ntBASIC4.28□□□□□ -1.72
VSX2P58304 AC023762.1-201ENST00000603280 584 ntBASIC4.28□□□□□ -1.72
VSX2P58304 AC103792.1-201ENST00000603591 919 ntBASIC4.28□□□□□ -1.72
VSX2P58304 AL035461.2-201ENST00000619201 524 ntBASIC4.28□□□□□ -1.72
VSX2P58304 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VSX2P58304 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
VSX2P58304 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
VSX2P58304 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
VSX2P58304 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.27□□□□□ -1.73
VSX2P58304 NXPH1-205ENST00000602349 1953 ntBASIC4.27□□□□□ -1.73
VSX2P58304 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VSX2P58304 ZMYM6-201ENST00000317538 2702 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
VSX2P58304 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.27□□□□□ -1.73
VSX2P58304 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VSX2P58304 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC4.27□□□□□ -1.73
VSX2P58304 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VSX2P58304 CYP19A1-201ENST00000396402 4417 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
VSX2P58304 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.27□□□□□ -1.73
VSX2P58304 RNU4-39P-201ENST00000362455 127 ntBASIC4.27□□□□□ -1.73
VSX2P58304 SNORA62-201ENST00000365493 153 ntBASIC4.27□□□□□ -1.73
VSX2P58304 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VSX2P58304 RPL23AP59-201ENST00000399415 461 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC4.27□□□□□ -1.73
VSX2P58304 COX6CP17-201ENST00000421389 185 ntBASIC4.27□□□□□ -1.73
VSX2P58304 GTF2IP2-201ENST00000424290 697 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AL732292.1-201ENST00000426692 226 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.27□□□□□ -1.73
VSX2P58304 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC4.27□□□□□ -1.73
VSX2P58304 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
VSX2P58304 MTND6P32-201ENST00000457611 483 ntBASIC4.27□□□□□ -1.73
VSX2P58304 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.27□□□□□ -1.73
VSX2P58304 SEPT7P6-201ENST00000469999 1143 ntBASIC4.27□□□□□ -1.73
VSX2P58304 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC4.27□□□□□ -1.73
VSX2P58304 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.27□□□□□ -1.73
VSX2P58304 UBA52P3-201ENST00000491303 382 ntBASIC4.27□□□□□ -1.73
VSX2P58304 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.27□□□□□ -1.73
VSX2P58304 AK4P6-201ENST00000505168 528 ntBASIC4.27□□□□□ -1.73
VSX2P58304 HPRT1P1-201ENST00000509498 657 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AC034205.1-201ENST00000520621 638 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AP001804.2-201ENST00000533932 910 ntBASIC4.27□□□□□ -1.73
VSX2P58304 GLRXP2-201ENST00000555594 321 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AC068831.4-201ENST00000556118 109 ntBASIC4.27□□□□□ -1.73
VSX2P58304 CD24P2-201ENST00000565486 219 ntBASIC4.27□□□□□ -1.73
VSX2P58304 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.27□□□□□ -1.73
VSX2P58304 AP001160.4-201ENST00000596971 382 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AC005191.1-201ENST00000603950 358 ntBASIC4.27□□□□□ -1.73
VSX2P58304 AL356218.2-201ENST00000605264 187 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms