Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 RMST_10.1-201ENST00000616309 154 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AL353662.3-201ENST00000625131 237 ntBASIC4.52□□□□□ -1.69
CDH11P55287 AC099654.9-201ENST00000637055 678 ntBASIC4.52□□□□□ -1.69
CDH11P55287 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
CDH11P55287 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
CDH11P55287 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
CDH11P55287 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
CDH11P55287 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.52□□□□□ -1.69
CDH11P55287 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH11P55287 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
CDH11P55287 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 LRRC37BP1-201ENST00000398851 714 ntBASIC4.51□□□□□ -1.69
CDH11P55287 MIR1182-201ENST00000408363 97 ntBASIC4.51□□□□□ -1.69
CDH11P55287 SNORA79B-201ENST00000410557 148 ntBASIC4.51□□□□□ -1.69
CDH11P55287 LINC01507-201ENST00000417801 446 ntTSL 5 BASIC4.51□□□□□ -1.69
CDH11P55287 QRSL1P2-201ENST00000418582 964 ntBASIC4.51□□□□□ -1.69
CDH11P55287 CKS1BP6-201ENST00000424932 240 ntBASIC4.51□□□□□ -1.69
CDH11P55287 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH11P55287 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 FSIP2-AS1-202ENST00000436557 689 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH11P55287 AC004854.1-201ENST00000440356 349 ntBASIC4.51□□□□□ -1.69
CDH11P55287 AL606517.1-201ENST00000446914 387 ntBASIC4.51□□□□□ -1.69
CDH11P55287 RHEBP2-201ENST00000450289 600 ntBASIC4.51□□□□□ -1.69
CDH11P55287 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH11P55287 AC018742.1-202ENST00000457901 504 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH11P55287 RPL35AP28-201ENST00000459730 331 ntBASIC4.51□□□□□ -1.69
CDH11P55287 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 WDR78-207ENST00000488333 613 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH11P55287 GTF2IP9-201ENST00000502460 301 ntBASIC4.51□□□□□ -1.69
CDH11P55287 RN7SKP260-201ENST00000516907 149 ntBASIC4.51□□□□□ -1.69
CDH11P55287 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.51□□□□□ -1.69
CDH11P55287 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC4.51□□□□□ -1.69
CDH11P55287 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH11P55287 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH11P55287 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC4.51□□□□□ -1.69
CDH11P55287 AC116651.1-201ENST00000609724 556 ntBASIC4.51□□□□□ -1.69
CDH11P55287 EIF3FP1-201ENST00000613970 806 ntBASIC4.51□□□□□ -1.69
CDH11P55287 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC4.51□□□□□ -1.69
CDH11P55287 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 HSPD1P11-201ENST00000508643 1702 ntBASIC4.51□□□□□ -1.69
CDH11P55287 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
CDH11P55287 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.51□□□□□ -1.69
CDH11P55287 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH11P55287 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
CDH11P55287 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 AL672167.1-205ENST00000641112 3080 ntBASIC4.5□□□□□ -1.69
CDH11P55287 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
CDH11P55287 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 ALB-219ENST00000621085 1418 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH11P55287 CASC19-206ENST00000641028 1430 ntBASIC4.5□□□□□ -1.69
CDH11P55287 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
CDH11P55287 SNURFL-201ENST00000309296 343 ntBASIC4.5□□□□□ -1.69
CDH11P55287 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDH11P55287 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH11P55287 RNU6-532P-201ENST00000384318 107 ntBASIC4.5□□□□□ -1.69
CDH11P55287 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
CDH11P55287 AP000580.1-201ENST00000404439 358 ntBASIC4.5□□□□□ -1.69
CDH11P55287 NUDT19P3-201ENST00000404698 555 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH11P55287 UBE2V1P9-201ENST00000414760 368 ntBASIC4.5□□□□□ -1.69
CDH11P55287 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH11P55287 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC008173.1-201ENST00000418901 264 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH11P55287 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH11P55287 AC241520.1-201ENST00000422654 1099 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AL590762.4-201ENST00000425885 253 ntBASIC4.5□□□□□ -1.69
CDH11P55287 MTCO1P52-201ENST00000433928 531 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.5□□□□□ -1.69
CDH11P55287 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH11P55287 AC073052.1-201ENST00000440417 714 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AL450023.3-201ENST00000440592 271 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH11P55287 RPL6P5-201ENST00000445678 828 ntBASIC4.5□□□□□ -1.69
CDH11P55287 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH11P55287 snoU13.20-201ENST00000459180 104 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH11P55287 PRELID3BP6-201ENST00000503839 571 ntBASIC4.5□□□□□ -1.69
CDH11P55287 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH11P55287 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.5□□□□□ -1.69
CDH11P55287 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH11P55287 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC4.5□□□□□ -1.69
CDH11P55287 AP001922.4-201ENST00000526967 290 ntBASIC4.5□□□□□ -1.69
CDH11P55287 AC022882.1-201ENST00000532142 501 ntBASIC4.5□□□□□ -1.69
CDH11P55287 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
CDH11P55287 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.5□□□□□ -1.69
CDH11P55287 AL121594.4-201ENST00000556211 1196 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms