Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 AC105918.1-201ENST00000474399 838 ntBASIC5.04□□□□□ -1.6
VCPP55072 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC5.04□□□□□ -1.6
VCPP55072 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.04□□□□□ -1.6
VCPP55072 AC106806.2-201ENST00000509365 500 ntBASIC5.04□□□□□ -1.6
VCPP55072 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC5.04□□□□□ -1.6
VCPP55072 RN7SKP46-201ENST00000515942 234 ntBASIC5.04□□□□□ -1.6
VCPP55072 RNU6-551P-201ENST00000516661 103 ntBASIC5.04□□□□□ -1.6
VCPP55072 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VCPP55072 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC5.04□□□□□ -1.6
VCPP55072 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.04□□□□□ -1.6
VCPP55072 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC5.04□□□□□ -1.6
VCPP55072 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.04□□□□□ -1.6
VCPP55072 AL049839.1-201ENST00000556151 657 ntBASIC5.04□□□□□ -1.6
VCPP55072 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC5.04□□□□□ -1.6
VCPP55072 AC009303.3-201ENST00000591103 736 ntBASIC5.04□□□□□ -1.6
VCPP55072 AC133552.5-201ENST00000604266 540 ntBASIC5.04□□□□□ -1.6
VCPP55072 OR7M1P-201ENST00000608946 533 ntBASIC5.04□□□□□ -1.6
VCPP55072 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC5.04□□□□□ -1.6
VCPP55072 AL356274.1-201ENST00000617064 410 ntBASIC5.04□□□□□ -1.6
VCPP55072 AC131238.1-201ENST00000617135 328 ntBASIC5.04□□□□□ -1.6
VCPP55072 PDCD6IPP1-202ENST00000622242 1064 ntBASIC5.04□□□□□ -1.6
VCPP55072 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.04□□□□□ -1.6
VCPP55072 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.04□□□□□ -1.6
VCPP55072 AC006453.5-201ENST00000636451 619 ntBASIC5.04□□□□□ -1.6
VCPP55072 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VCPP55072 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
VCPP55072 AL359922.3-201ENST00000624779 1670 ntBASIC5.04□□□□□ -1.6
VCPP55072 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.04□□□□□ -1.6
VCPP55072 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
VCPP55072 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
VCPP55072 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VCPP55072 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
VCPP55072 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.04□□□□□ -1.6
VCPP55072 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.04□□□□□ -1.6
VCPP55072 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.03□□□□□ -1.6
VCPP55072 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VCPP55072 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
VCPP55072 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
VCPP55072 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VCPP55072 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VCPP55072 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VCPP55072 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
VCPP55072 RNU6-761P-201ENST00000384148 107 ntBASIC5.03□□□□□ -1.6
VCPP55072 RNU6-178P-201ENST00000384631 104 ntBASIC5.03□□□□□ -1.6
VCPP55072 U3.30-201ENST00000391308 210 ntBASIC5.03□□□□□ -1.6
VCPP55072 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.03□□□□□ -1.6
VCPP55072 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.03□□□□□ -1.6
VCPP55072 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC5.03□□□□□ -1.6
VCPP55072 AC243772.1-201ENST00000451620 410 ntBASIC5.03□□□□□ -1.6
VCPP55072 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.03□□□□□ -1.6
VCPP55072 LINC02278-201ENST00000512170 500 ntTSL 5 BASIC5.03□□□□□ -1.6
VCPP55072 RNU6-751P-201ENST00000516382 101 ntBASIC5.03□□□□□ -1.6
VCPP55072 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC5.03□□□□□ -1.6
VCPP55072 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.03□□□□□ -1.6
VCPP55072 AP001781.1-201ENST00000530977 207 ntBASIC5.03□□□□□ -1.6
VCPP55072 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC5.03□□□□□ -1.6
VCPP55072 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC5.03□□□□□ -1.6
VCPP55072 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC5.03□□□□□ -1.6
VCPP55072 AC087477.6-201ENST00000559595 843 ntBASIC5.03□□□□□ -1.6
VCPP55072 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.03□□□□□ -1.6
VCPP55072 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC5.03□□□□□ -1.6
VCPP55072 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.03□□□□□ -1.6
VCPP55072 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC5.03□□□□□ -1.6
VCPP55072 AC015922.4-201ENST00000612568 690 ntBASIC5.03□□□□□ -1.6
VCPP55072 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VCPP55072 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.03□□□□□ -1.6
VCPP55072 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
VCPP55072 AL133268.1-201ENST00000405676 1401 ntBASIC5.03□□□□□ -1.6
VCPP55072 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
VCPP55072 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VCPP55072 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
VCPP55072 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.02□□□□□ -1.61
VCPP55072 MTCO1P8-201ENST00000416914 1523 ntBASIC5.02□□□□□ -1.61
VCPP55072 AC120338.1-201ENST00000625074 1541 ntBASIC5.02□□□□□ -1.61
VCPP55072 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.02□□□□□ -1.61
VCPP55072 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
VCPP55072 ST13P16-201ENST00000401760 781 ntBASIC5.02□□□□□ -1.61
VCPP55072 RNA5SP44-201ENST00000410446 133 ntBASIC5.02□□□□□ -1.61
VCPP55072 RNA5SP345-201ENST00000410646 108 ntBASIC5.02□□□□□ -1.61
VCPP55072 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.02□□□□□ -1.61
VCPP55072 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.02□□□□□ -1.61
VCPP55072 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.02□□□□□ -1.61
VCPP55072 E2F6P2-201ENST00000420708 748 ntBASIC5.02□□□□□ -1.61
VCPP55072 RAD23BP1-201ENST00000421404 1227 ntBASIC5.02□□□□□ -1.61
VCPP55072 FABP7P1-201ENST00000424004 391 ntBASIC5.02□□□□□ -1.61
VCPP55072 AP001324.1-201ENST00000428553 399 ntBASIC5.02□□□□□ -1.61
VCPP55072 AC092447.2-201ENST00000435487 669 ntBASIC5.02□□□□□ -1.61
VCPP55072 AC108751.2-201ENST00000469993 231 ntBASIC5.02□□□□□ -1.61
VCPP55072 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC5.02□□□□□ -1.61
VCPP55072 AC007016.1-201ENST00000512110 244 ntBASIC5.02□□□□□ -1.61
VCPP55072 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.02□□□□□ -1.61
VCPP55072 RNU6-709P-201ENST00000517257 104 ntBASIC5.02□□□□□ -1.61
VCPP55072 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.02□□□□□ -1.61
VCPP55072 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.8 ms