Protein–RNA interactions for Protein: P52435

POLR2J, DNA-directed RNA polymerase II subunit RPB11-a, humanhuman

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2JP52435 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.97□□□□□ -1.77
POLR2JP52435 EIF2AP4-201ENST00000424793 1781 ntBASIC3.97□□□□□ -1.77
POLR2JP52435 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC3.96□□□□□ -1.77
POLR2JP52435 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC3.96□□□□□ -1.77
POLR2JP52435 LINC02471-203ENST00000641941 4752 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2JP52435 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2JP52435 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2JP52435 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2JP52435 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
POLR2JP52435 FAM3C2-201ENST00000312214 681 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 RNU1-14P-201ENST00000362759 152 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 AC092642.1-201ENST00000392417 425 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.96□□□□□ -1.78
POLR2JP52435 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC3.96□□□□□ -1.78
POLR2JP52435 USP9YP9-201ENST00000429406 715 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.96□□□□□ -1.78
POLR2JP52435 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC3.96□□□□□ -1.78
POLR2JP52435 FGF7P3-201ENST00000454645 303 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 RPL36AP13-201ENST00000457490 317 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 AC110749.1-201ENST00000462007 357 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 AC109327.1-201ENST00000471666 403 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 RPS27AP16-201ENST00000492222 470 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 RPL31P61-201ENST00000496160 376 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 DERA-209ENST00000532964 854 ntTSL 5 BASIC3.96□□□□□ -1.78
POLR2JP52435 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2JP52435 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC3.96□□□□□ -1.78
POLR2JP52435 AC090515.3-201ENST00000560431 315 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.96□□□□□ -1.78
POLR2JP52435 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.96□□□□□ -1.78
POLR2JP52435 QTRT1P1-201ENST00000604344 1078 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC3.96□□□□□ -1.78
POLR2JP52435 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
POLR2JP52435 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2JP52435 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2JP52435 AC025031.4-201ENST00000621248 3271 ntBASIC3.96□□□□□ -1.78
POLR2JP52435 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2JP52435 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.78
POLR2JP52435 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
POLR2JP52435 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2JP52435 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2JP52435 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.95□□□□□ -1.78
POLR2JP52435 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2JP52435 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
POLR2JP52435 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2JP52435 ERCC6-202ENST00000374127 1782 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2JP52435 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2JP52435 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2JP52435 NRBF2P2-201ENST00000413087 861 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 RPL6P29-201ENST00000414863 865 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 P2RY10P2-201ENST00000416730 913 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC3.95□□□□□ -1.78
POLR2JP52435 AC087650.1-201ENST00000431445 468 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 RPL23AP46-201ENST00000438548 490 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 RPL12P3-201ENST00000440080 396 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 VN1R25P-201ENST00000443385 738 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 MTND2P25-201ENST00000449028 610 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 OR2AF1P-201ENST00000454899 889 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 VN1R40P-201ENST00000455196 941 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 RPL7P32-201ENST00000457119 744 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 RN7SL98P-201ENST00000462271 300 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 RPL23AP71-201ENST00000470966 469 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 AC109458.1-201ENST00000508858 316 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
POLR2JP52435 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC3.95□□□□□ -1.78
POLR2JP52435 AP001804.2-201ENST00000533932 910 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.95□□□□□ -1.78
POLR2JP52435 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.95□□□□□ -1.78
POLR2JP52435 RPL23AP87-202ENST00000573039 466 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC3.95□□□□□ -1.78
POLR2JP52435 AL133406.3-201ENST00000606817 541 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 AP003392.5-201ENST00000607857 415 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 AP000255.1-201ENST00000610276 676 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 FAM27D1-201ENST00000612308 341 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.95□□□□□ -1.78
POLR2JP52435 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.95□□□□□ -1.78
POLR2JP52435 AC090246.1-201ENST00000616499 426 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 CASC19-222ENST00000641321 1173 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.95□□□□□ -1.78
POLR2JP52435 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.95□□□□□ -1.78
POLR2JP52435 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2JP52435 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
POLR2JP52435 AL158163.1-201ENST00000603915 1649 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
POLR2JP52435 AC010300.1-201ENST00000600671 5134 ntBASIC3.95□□□□□ -1.78
POLR2JP52435 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
POLR2JP52435 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
POLR2JP52435 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
POLR2JP52435 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
POLR2JP52435 RNA5SP513-201ENST00000364648 118 ntBASIC3.94□□□□□ -1.78
POLR2JP52435 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
POLR2JP52435 ZNF603P-201ENST00000405613 487 ntBASIC3.94□□□□□ -1.78
POLR2JP52435 FAR2P2-201ENST00000413041 594 ntBASIC3.94□□□□□ -1.78
POLR2JP52435 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC3.94□□□□□ -1.78
POLR2JP52435 AL590762.4-201ENST00000425885 253 ntBASIC3.94□□□□□ -1.78
POLR2JP52435 AL356535.1-201ENST00000440335 398 ntBASIC3.94□□□□□ -1.78
POLR2JP52435 AC073264.2-201ENST00000448886 166 ntBASIC3.94□□□□□ -1.78
POLR2JP52435 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms