Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC6.23□□□□□ -1.41
MRE11P49959 Z95331.1-201ENST00000623075 23112 ntBASIC6.23□□□□□ -1.41
MRE11P49959 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
MRE11P49959 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MRE11P49959 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MRE11P49959 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MRE11P49959 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
MRE11P49959 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC6.22□□□□□ -1.41
MRE11P49959 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.22□□□□□ -1.41
MRE11P49959 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.22□□□□□ -1.41
MRE11P49959 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC6.22□□□□□ -1.41
MRE11P49959 AC013442.1-201ENST00000397347 228 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC6.22□□□□□ -1.41
MRE11P49959 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC6.22□□□□□ -1.41
MRE11P49959 RPL36AP10-201ENST00000421785 322 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.22□□□□□ -1.41
MRE11P49959 C4BPAP2-201ENST00000428434 478 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC6.22□□□□□ -1.41
MRE11P49959 NPM1P33-201ENST00000438918 872 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AL031584.1-201ENST00000447169 754 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AL450023.1-201ENST00000450868 751 ntBASIC6.22□□□□□ -1.41
MRE11P49959 MTND1P27-201ENST00000451117 902 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AC239798.3-201ENST00000454459 408 ntBASIC6.22□□□□□ -1.41
MRE11P49959 RN7SL591P-201ENST00000496150 292 ntBASIC6.22□□□□□ -1.41
MRE11P49959 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
MRE11P49959 SUMO1P1-201ENST00000497904 306 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AC108935.1-201ENST00000504874 518 ntTSL 2 BASIC6.22□□□□□ -1.41
MRE11P49959 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.22□□□□□ -1.41
MRE11P49959 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC6.22□□□□□ -1.41
MRE11P49959 RNA5SP464-201ENST00000516251 108 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC6.22□□□□□ -1.41
MRE11P49959 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC6.22□□□□□ -1.41
MRE11P49959 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MRE11P49959 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.22□□□□□ -1.41
MRE11P49959 OR1F2P-201ENST00000570470 933 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AC069366.1-201ENST00000583159 838 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC6.22□□□□□ -1.41
MRE11P49959 AC133644.2-201ENST00000608142 540 ntBASIC6.22□□□□□ -1.41
MRE11P49959 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.22□□□□□ -1.41
MRE11P49959 ZNF75A-210ENST00000617839 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MRE11P49959 AC073869.8-201ENST00000641806 335 ntBASIC6.22□□□□□ -1.41
MRE11P49959 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
MRE11P49959 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
MRE11P49959 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
MRE11P49959 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
MRE11P49959 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MRE11P49959 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
MRE11P49959 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC6.21□□□□□ -1.41
MRE11P49959 AC005261.4-201ENST00000600047 1385 ntBASIC6.21□□□□□ -1.41
MRE11P49959 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
MRE11P49959 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
MRE11P49959 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MRE11P49959 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MRE11P49959 SNORD56.4-201ENST00000363883 71 ntBASIC6.21□□□□□ -1.42
MRE11P49959 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MRE11P49959 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.21□□□□□ -1.42
MRE11P49959 SNORD116-12-201ENST00000384468 92 ntBASIC6.21□□□□□ -1.42
MRE11P49959 RNU6-648P-201ENST00000410190 107 ntBASIC6.21□□□□□ -1.42
MRE11P49959 RN7SKP273-201ENST00000411392 314 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC6.21□□□□□ -1.42
MRE11P49959 AL008987.1-201ENST00000415528 237 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC6.21□□□□□ -1.42
MRE11P49959 AC005345.1-201ENST00000431868 217 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AC090018.1-201ENST00000434369 367 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC6.21□□□□□ -1.42
MRE11P49959 AL008629.1-201ENST00000438615 184 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC6.21□□□□□ -1.42
MRE11P49959 RPS27P5-201ENST00000444247 244 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC6.21□□□□□ -1.42
MRE11P49959 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC6.21□□□□□ -1.42
MRE11P49959 AL157884.3-201ENST00000448273 1184 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AL122020.1-201ENST00000472287 459 ntBASIC6.21□□□□□ -1.42
MRE11P49959 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
MRE11P49959 CREM-230ENST00000474931 626 ntTSL 2 BASIC6.21□□□□□ -1.42
MRE11P49959 RPL5P22-201ENST00000480199 884 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AC099521.1-201ENST00000482557 334 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AC073610.1-201ENST00000489971 396 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AC091951.3-201ENST00000504093 246 ntBASIC6.21□□□□□ -1.42
MRE11P49959 RNA5SP303-201ENST00000516192 130 ntBASIC6.21□□□□□ -1.42
MRE11P49959 PTS-202ENST00000524931 696 ntTSL 3 BASIC6.21□□□□□ -1.42
MRE11P49959 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC6.21□□□□□ -1.42
MRE11P49959 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.21□□□□□ -1.42
MRE11P49959 AC007599.1-201ENST00000568688 1174 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.21□□□□□ -1.42
MRE11P49959 MIR4311-201ENST00000580794 100 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.21□□□□□ -1.42
MRE11P49959 BNIP3P33-201ENST00000598912 569 ntBASIC6.21□□□□□ -1.42
MRE11P49959 MIR6809-201ENST00000612189 116 ntBASIC6.21□□□□□ -1.42
MRE11P49959 RMST_10.1-201ENST00000616309 154 ntBASIC6.21□□□□□ -1.42
MRE11P49959 AC123767.1-202ENST00000620407 817 ntBASIC6.21□□□□□ -1.42
MRE11P49959 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.21□□□□□ -1.42
MRE11P49959 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC6.21□□□□□ -1.42
MRE11P49959 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.21□□□□□ -1.42
MRE11P49959 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC6.21□□□□□ -1.42
MRE11P49959 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
MRE11P49959 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
MRE11P49959 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MRE11P49959 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.21□□□□□ -1.42
MRE11P49959 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MRE11P49959 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms