Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.77□□□□□ -1.65
CASP4P49662 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.77□□□□□ -1.65
CASP4P49662 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.77□□□□□ -1.65
CASP4P49662 DDX18P3-201ENST00000404856 2007 ntBASIC4.77□□□□□ -1.65
CASP4P49662 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
CASP4P49662 DDX18P4-201ENST00000511690 1966 ntBASIC4.77□□□□□ -1.65
CASP4P49662 AC067945.1-201ENST00000342609 618 ntBASIC4.77□□□□□ -1.65
CASP4P49662 IGKV7-3-201ENST00000357453 298 ntBASIC4.77□□□□□ -1.65
CASP4P49662 AC104297.1-201ENST00000393779 870 ntBASIC4.77□□□□□ -1.65
CASP4P49662 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.77□□□□□ -1.65
CASP4P49662 RPA2P2-201ENST00000419698 796 ntBASIC4.77□□□□□ -1.65
CASP4P49662 RPS27AP7-201ENST00000422792 455 ntBASIC4.77□□□□□ -1.65
CASP4P49662 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.77□□□□□ -1.65
CASP4P49662 VN1R32P-201ENST00000452234 905 ntBASIC4.77□□□□□ -1.65
CASP4P49662 SEPT14P1-201ENST00000458703 648 ntBASIC4.77□□□□□ -1.65
CASP4P49662 RN7SL41P-201ENST00000476144 297 ntBASIC4.77□□□□□ -1.65
CASP4P49662 RPS23P1-201ENST00000491662 432 ntBASIC4.77□□□□□ -1.65
CASP4P49662 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.77□□□□□ -1.65
CASP4P49662 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.77□□□□□ -1.65
CASP4P49662 CR383656.6-201ENST00000550518 394 ntBASIC4.77□□□□□ -1.65
CASP4P49662 AC023034.1-201ENST00000558141 518 ntTSL 3 BASIC4.77□□□□□ -1.65
CASP4P49662 AC130650.1-201ENST00000570581 415 ntTSL 2 BASIC4.77□□□□□ -1.65
CASP4P49662 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC4.77□□□□□ -1.65
CASP4P49662 AL135786.2-201ENST00000608422 615 ntBASIC4.77□□□□□ -1.65
CASP4P49662 AL138721.1-201ENST00000616756 179 ntBASIC4.77□□□□□ -1.65
CASP4P49662 FP325313.1-201ENST00000638228 703 ntBASIC4.77□□□□□ -1.65
CASP4P49662 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.77□□□□□ -1.65
CASP4P49662 AC017104.4-201ENST00000636283 1592 ntBASIC4.77□□□□□ -1.65
CASP4P49662 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.77□□□□□ -1.65
CASP4P49662 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CASP4P49662 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.76□□□□□ -1.65
CASP4P49662 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.76□□□□□ -1.65
CASP4P49662 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.76□□□□□ -1.65
CASP4P49662 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.76□□□□□ -1.65
CASP4P49662 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.76□□□□□ -1.65
CASP4P49662 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CASP4P49662 OR5P1P-201ENST00000299512 925 ntBASIC4.76□□□□□ -1.65
CASP4P49662 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CASP4P49662 SNORD66.1-201ENST00000391230 76 ntBASIC4.76□□□□□ -1.65
CASP4P49662 AL356317.1-201ENST00000396110 1436 ntBASIC4.76□□□□□ -1.65
CASP4P49662 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.76□□□□□ -1.65
CASP4P49662 CNOT7P1-201ENST00000429006 852 ntBASIC4.76□□□□□ -1.65
CASP4P49662 SKP1P3-201ENST00000429280 487 ntBASIC4.76□□□□□ -1.65
CASP4P49662 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.76□□□□□ -1.65
CASP4P49662 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.76□□□□□ -1.65
CASP4P49662 HSPE1P22-201ENST00000456856 327 ntBASIC4.76□□□□□ -1.65
CASP4P49662 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.76□□□□□ -1.65
CASP4P49662 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.76□□□□□ -1.65
CASP4P49662 RPL7P22-201ENST00000466005 733 ntBASIC4.76□□□□□ -1.65
CASP4P49662 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.76□□□□□ -1.65
CASP4P49662 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CASP4P49662 TCP11X3P-202ENST00000514289 1254 ntBASIC4.76□□□□□ -1.65
CASP4P49662 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.76□□□□□ -1.65
CASP4P49662 AC021483.2-201ENST00000567415 758 ntBASIC4.76□□□□□ -1.65
CASP4P49662 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC4.76□□□□□ -1.65
CASP4P49662 AC138473.1-201ENST00000605717 526 ntBASIC4.76□□□□□ -1.65
CASP4P49662 AL592494.3-201ENST00000609485 464 ntBASIC4.76□□□□□ -1.65
CASP4P49662 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.76□□□□□ -1.65
CASP4P49662 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CASP4P49662 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
CASP4P49662 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.76□□□□□ -1.65
CASP4P49662 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CASP4P49662 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CASP4P49662 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CASP4P49662 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
CASP4P49662 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
CASP4P49662 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CASP4P49662 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CASP4P49662 RNU4-39P-201ENST00000362455 127 ntBASIC4.75□□□□□ -1.65
CASP4P49662 RNA5-8SP7-201ENST00000363443 155 ntBASIC4.75□□□□□ -1.65
CASP4P49662 VN1R8P-201ENST00000407739 893 ntBASIC4.75□□□□□ -1.65
CASP4P49662 ELOCP19-201ENST00000411919 318 ntBASIC4.75□□□□□ -1.65
CASP4P49662 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.75□□□□□ -1.65
CASP4P49662 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CASP4P49662 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.75□□□□□ -1.65
CASP4P49662 AC245028.1-201ENST00000423259 256 ntBASIC4.75□□□□□ -1.65
CASP4P49662 AC068287.1-201ENST00000430283 295 ntBASIC4.75□□□□□ -1.65
CASP4P49662 RPL12P28-201ENST00000430852 489 ntBASIC4.75□□□□□ -1.65
CASP4P49662 AC079804.1-201ENST00000461922 436 ntBASIC4.75□□□□□ -1.65
CASP4P49662 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CASP4P49662 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.75□□□□□ -1.65
CASP4P49662 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC4.75□□□□□ -1.65
CASP4P49662 AC010476.1-201ENST00000519111 851 ntBASIC4.75□□□□□ -1.65
CASP4P49662 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.75□□□□□ -1.65
CASP4P49662 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CASP4P49662 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.75□□□□□ -1.65
CASP4P49662 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.75□□□□□ -1.65
CASP4P49662 AC104785.1-201ENST00000603220 588 ntBASIC4.75□□□□□ -1.65
CASP4P49662 AC090948.1-201ENST00000607464 549 ntBASIC4.75□□□□□ -1.65
CASP4P49662 AC015922.4-201ENST00000612568 690 ntBASIC4.75□□□□□ -1.65
CASP4P49662 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.75□□□□□ -1.65
CASP4P49662 AL590410.1-201ENST00000617925 333 ntBASIC4.75□□□□□ -1.65
CASP4P49662 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
CASP4P49662 MAPK10-349ENST00000641767 3661 ntBASIC4.75□□□□□ -1.65
CASP4P49662 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
CASP4P49662 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CASP4P49662 AC090017.1-201ENST00000548612 1779 ntBASIC4.75□□□□□ -1.65
CASP4P49662 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CASP4P49662 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.74□□□□□ -1.65
CASP4P49662 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms