Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNU6-146P-201ENST00000384602 108 ntBASIC4.43□□□□□ -1.7
RORAP35398 ATP5F1P2-201ENST00000398143 760 ntBASIC4.43□□□□□ -1.7
RORAP35398 RNA5SP146-201ENST00000410743 123 ntBASIC4.43□□□□□ -1.7
RORAP35398 RNU6-603P-201ENST00000411403 107 ntBASIC4.43□□□□□ -1.7
RORAP35398 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.43□□□□□ -1.7
RORAP35398 E2F6P2-201ENST00000420708 748 ntBASIC4.43□□□□□ -1.7
RORAP35398 RCC2P2-201ENST00000422174 918 ntBASIC4.43□□□□□ -1.7
RORAP35398 RPEP3-201ENST00000425462 676 ntBASIC4.43□□□□□ -1.7
RORAP35398 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.43□□□□□ -1.7
RORAP35398 AL162591.2-201ENST00000449634 317 ntBASIC4.43□□□□□ -1.7
RORAP35398 OR7L1P-201ENST00000456181 380 ntBASIC4.43□□□□□ -1.7
RORAP35398 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.43□□□□□ -1.7
RORAP35398 MTND4LP2-201ENST00000502312 285 ntBASIC4.43□□□□□ -1.7
RORAP35398 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.43□□□□□ -1.7
RORAP35398 HMGB3P13-201ENST00000511263 607 ntBASIC4.43□□□□□ -1.7
RORAP35398 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.43□□□□□ -1.7
RORAP35398 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC4.43□□□□□ -1.7
RORAP35398 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.43□□□□□ -1.7
RORAP35398 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.43□□□□□ -1.7
RORAP35398 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC4.43□□□□□ -1.7
RORAP35398 FKBP1BP1-201ENST00000553366 325 ntBASIC4.43□□□□□ -1.7
RORAP35398 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.43□□□□□ -1.7
RORAP35398 AC087477.6-201ENST00000559595 843 ntBASIC4.43□□□□□ -1.7
RORAP35398 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 MIR4697-201ENST00000582977 78 ntBASIC4.43□□□□□ -1.7
RORAP35398 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.43□□□□□ -1.7
RORAP35398 AC073137.1-201ENST00000605636 634 ntBASIC4.43□□□□□ -1.7
RORAP35398 OR7A19P-201ENST00000608051 733 ntBASIC4.43□□□□□ -1.7
RORAP35398 AC083809.1-201ENST00000615051 472 ntBASIC4.43□□□□□ -1.7
RORAP35398 AC015722.2-201ENST00000622210 551 ntBASIC4.43□□□□□ -1.7
RORAP35398 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.43□□□□□ -1.7
RORAP35398 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.43□□□□□ -1.7
RORAP35398 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.43□□□□□ -1.7
RORAP35398 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
RORAP35398 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.43□□□□□ -1.7
RORAP35398 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.43□□□□□ -1.7
RORAP35398 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
RORAP35398 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.42□□□□□ -1.7
RORAP35398 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 SALL4P2-201ENST00000423288 2910 ntBASIC4.42□□□□□ -1.7
RORAP35398 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.42□□□□□ -1.7
RORAP35398 BTG4-203ENST00000525791 1394 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.42□□□□□ -1.7
RORAP35398 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RORAP35398 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.42□□□□□ -1.7
RORAP35398 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.42□□□□□ -1.7
RORAP35398 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.42□□□□□ -1.7
RORAP35398 UQCRBP1-201ENST00000421129 336 ntBASIC4.42□□□□□ -1.7
RORAP35398 COX6CP17-201ENST00000421389 185 ntBASIC4.42□□□□□ -1.7
RORAP35398 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.42□□□□□ -1.7
RORAP35398 RPL7P57-201ENST00000423238 740 ntBASIC4.42□□□□□ -1.7
RORAP35398 CKS1BP6-201ENST00000424932 240 ntBASIC4.42□□□□□ -1.7
RORAP35398 IPMKP1-201ENST00000425988 855 ntBASIC4.42□□□□□ -1.7
RORAP35398 NMNAT1P2-201ENST00000435192 860 ntBASIC4.42□□□□□ -1.7
RORAP35398 AC092013.1-201ENST00000438795 332 ntBASIC4.42□□□□□ -1.7
RORAP35398 YWHAZP2-201ENST00000440317 728 ntBASIC4.42□□□□□ -1.7
RORAP35398 ELOCP10-201ENST00000440624 327 ntBASIC4.42□□□□□ -1.7
RORAP35398 ARL4AP3-201ENST00000441452 574 ntBASIC4.42□□□□□ -1.7
RORAP35398 AL162388.1-201ENST00000450912 352 ntBASIC4.42□□□□□ -1.7
RORAP35398 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.42□□□□□ -1.7
RORAP35398 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.42□□□□□ -1.7
RORAP35398 AC092905.1-201ENST00000467527 949 ntBASIC4.42□□□□□ -1.7
RORAP35398 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.42□□□□□ -1.7
RORAP35398 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.42□□□□□ -1.7
RORAP35398 STMN1P2-201ENST00000508435 439 ntBASIC4.42□□□□□ -1.7
RORAP35398 AC021146.3-201ENST00000511911 260 ntBASIC4.42□□□□□ -1.7
RORAP35398 AC009643.1-201ENST00000532030 391 ntBASIC4.42□□□□□ -1.7
RORAP35398 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.42□□□□□ -1.7
RORAP35398 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.42□□□□□ -1.7
RORAP35398 ELOCP34-201ENST00000604436 327 ntBASIC4.42□□□□□ -1.7
RORAP35398 AC019131.2-201ENST00000609071 870 ntBASIC4.42□□□□□ -1.7
RORAP35398 AL592494.3-201ENST00000609485 464 ntBASIC4.42□□□□□ -1.7
RORAP35398 AC100847.1-201ENST00000611316 481 ntBASIC4.42□□□□□ -1.7
RORAP35398 AL158196.1-201ENST00000616786 434 ntBASIC4.42□□□□□ -1.7
RORAP35398 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
RORAP35398 AC015813.6-201ENST00000624409 5808 ntBASIC4.42□□□□□ -1.7
RORAP35398 ADGRL2-203ENST00000370713 5382 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.42□□□□□ -1.7
RORAP35398 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.42□□□□□ -1.7
RORAP35398 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 OR5H14-202ENST00000641380 7323 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
RORAP35398 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.42□□□□□ -1.7
RORAP35398 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.42□□□□□ -1.7
RORAP35398 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
RORAP35398 CASC19-284ENST00000642142 1868 ntBASIC4.41□□□□□ -1.7
RORAP35398 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
RORAP35398 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
RORAP35398 AL445487.1-201ENST00000415694 1580 ntBASIC4.41□□□□□ -1.7
RORAP35398 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 144.7 ms