Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 MIR4675-201ENST00000577898 77 ntBASIC4.37□□□□□ -1.71
RPA3P35244 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.37□□□□□ -1.71
RPA3P35244 EIF4A2P1-201ENST00000587313 1063 ntBASIC4.37□□□□□ -1.71
RPA3P35244 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC4.37□□□□□ -1.71
RPA3P35244 AC093765.1-201ENST00000603758 881 ntBASIC4.37□□□□□ -1.71
RPA3P35244 AL161912.3-201ENST00000605404 628 ntBASIC4.37□□□□□ -1.71
RPA3P35244 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.37□□□□□ -1.71
RPA3P35244 AC096586.2-201ENST00000610260 441 ntBASIC4.37□□□□□ -1.71
RPA3P35244 MIR6820-201ENST00000611508 62 ntBASIC4.37□□□□□ -1.71
RPA3P35244 AC074276.2-201ENST00000619891 348 ntBASIC4.37□□□□□ -1.71
RPA3P35244 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.37□□□□□ -1.71
RPA3P35244 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPA3P35244 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.37□□□□□ -1.71
RPA3P35244 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC4.37□□□□□ -1.71
RPA3P35244 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.37□□□□□ -1.71
RPA3P35244 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RPA3P35244 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
RPA3P35244 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RPA3P35244 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPA3P35244 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RPA3P35244 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPA3P35244 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPA3P35244 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC4.36□□□□□ -1.71
RPA3P35244 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC4.36□□□□□ -1.71
RPA3P35244 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPA3P35244 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPA3P35244 RNU6-1263P-201ENST00000384601 106 ntBASIC4.36□□□□□ -1.71
RPA3P35244 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPA3P35244 AC233289.1-201ENST00000403700 508 ntBASIC4.36□□□□□ -1.71
RPA3P35244 SNORA11B-201ENST00000408175 129 ntBASIC4.36□□□□□ -1.71
RPA3P35244 AC092570.3-201ENST00000420113 693 ntBASIC4.36□□□□□ -1.71
RPA3P35244 AP001324.1-201ENST00000428553 399 ntBASIC4.36□□□□□ -1.71
RPA3P35244 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.36□□□□□ -1.71
RPA3P35244 NDUFA5P1-201ENST00000433858 341 ntBASIC4.36□□□□□ -1.71
RPA3P35244 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.36□□□□□ -1.71
RPA3P35244 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.36□□□□□ -1.71
RPA3P35244 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.36□□□□□ -1.71
RPA3P35244 MTND2P28-201ENST00000457540 1044 ntBASIC4.36□□□□□ -1.71
RPA3P35244 AC107015.1-201ENST00000466902 747 ntBASIC4.36□□□□□ -1.71
RPA3P35244 RN7SL738P-201ENST00000470264 297 ntBASIC4.36□□□□□ -1.71
RPA3P35244 AC108145.1-201ENST00000503770 153 ntBASIC4.36□□□□□ -1.71
RPA3P35244 AK3P4-201ENST00000504283 583 ntBASIC4.36□□□□□ -1.71
RPA3P35244 AC025554.1-201ENST00000505641 188 ntBASIC4.36□□□□□ -1.71
RPA3P35244 RFPL4AP5-201ENST00000514977 504 ntBASIC4.36□□□□□ -1.71
RPA3P35244 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPA3P35244 AL121839.1-201ENST00000556233 1185 ntBASIC4.36□□□□□ -1.71
RPA3P35244 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.36□□□□□ -1.71
RPA3P35244 AC234775.3-201ENST00000564612 656 ntBASIC4.36□□□□□ -1.71
RPA3P35244 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RPA3P35244 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RPA3P35244 AC020915.5-201ENST00000596836 964 ntBASIC4.36□□□□□ -1.71
RPA3P35244 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.36□□□□□ -1.71
RPA3P35244 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.36□□□□□ -1.71
RPA3P35244 AC002044.3-201ENST00000623314 541 ntBASIC4.36□□□□□ -1.71
RPA3P35244 AC138907.10-201ENST00000623708 983 ntBASIC4.36□□□□□ -1.71
RPA3P35244 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RPA3P35244 OR56B2P-202ENST00000641377 2453 ntBASIC4.36□□□□□ -1.71
RPA3P35244 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RPA3P35244 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPA3P35244 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPA3P35244 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RPA3P35244 RNA5SP332-201ENST00000391063 115 ntBASIC4.35□□□□□ -1.71
RPA3P35244 RNA5SP306-201ENST00000411087 107 ntBASIC4.35□□□□□ -1.71
RPA3P35244 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.35□□□□□ -1.71
RPA3P35244 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.35□□□□□ -1.71
RPA3P35244 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.35□□□□□ -1.71
RPA3P35244 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.35□□□□□ -1.71
RPA3P35244 RN7SL585P-201ENST00000470538 280 ntBASIC4.35□□□□□ -1.71
RPA3P35244 AC017037.1-201ENST00000508460 471 ntBASIC4.35□□□□□ -1.71
RPA3P35244 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.35□□□□□ -1.71
RPA3P35244 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.35□□□□□ -1.71
RPA3P35244 MIR4330-201ENST00000579077 105 ntBASIC4.35□□□□□ -1.71
RPA3P35244 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC4.35□□□□□ -1.71
RPA3P35244 AC234771.5-201ENST00000600161 514 ntBASIC4.35□□□□□ -1.71
RPA3P35244 VN1R81P-201ENST00000602085 372 ntBASIC4.35□□□□□ -1.71
RPA3P35244 AC019193.2-201ENST00000610012 634 ntBASIC4.35□□□□□ -1.71
RPA3P35244 MIR7703-201ENST00000620784 77 ntBASIC4.35□□□□□ -1.71
RPA3P35244 AC008785.1-201ENST00000624475 456 ntBASIC4.35□□□□□ -1.71
RPA3P35244 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC4.35□□□□□ -1.71
RPA3P35244 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.35□□□□□ -1.71
RPA3P35244 AC097504.1-201ENST00000515103 2415 ntBASIC4.35□□□□□ -1.71
RPA3P35244 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPA3P35244 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RPA3P35244 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RPA3P35244 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RPA3P35244 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPA3P35244 NOL8P1-201ENST00000508336 3529 ntBASIC4.34□□□□□ -1.71
RPA3P35244 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
RPA3P35244 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.34□□□□□ -1.71
RPA3P35244 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
RPA3P35244 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
RPA3P35244 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
RPA3P35244 RNU6-729P-201ENST00000384399 107 ntBASIC4.34□□□□□ -1.71
RPA3P35244 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC4.34□□□□□ -1.71
RPA3P35244 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.34□□□□□ -1.71
RPA3P35244 TRIM60P17-201ENST00000415181 719 ntBASIC4.34□□□□□ -1.71
RPA3P35244 RPL26P29-201ENST00000415623 438 ntBASIC4.34□□□□□ -1.71
RPA3P35244 VN1R31P-201ENST00000417498 730 ntBASIC4.34□□□□□ -1.71
RPA3P35244 OR51A6P-201ENST00000418680 1004 ntBASIC4.34□□□□□ -1.71
RPA3P35244 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms