Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.73□□□□□ -1.49
USP6P35125 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC5.73□□□□□ -1.49
USP6P35125 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC5.73□□□□□ -1.49
USP6P35125 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
USP6P35125 AC097461.1-201ENST00000568928 2821 ntBASIC5.73□□□□□ -1.49
USP6P35125 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.73□□□□□ -1.49
USP6P35125 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.73□□□□□ -1.49
USP6P35125 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
USP6P35125 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP6P35125 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP6P35125 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.72□□□□□ -1.49
USP6P35125 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP6P35125 CASC19-261ENST00000641853 1638 ntBASIC5.72□□□□□ -1.49
USP6P35125 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP6P35125 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP6P35125 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.72□□□□□ -1.49
USP6P35125 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
USP6P35125 AC116667.1-201ENST00000604855 2072 ntBASIC5.72□□□□□ -1.49
USP6P35125 CASC19-204ENST00000641001 2055 ntBASIC5.72□□□□□ -1.49
USP6P35125 RNA5SP372-201ENST00000390836 115 ntBASIC5.72□□□□□ -1.49
USP6P35125 RNU6ATAC-201ENST00000408749 126 ntBASIC5.72□□□□□ -1.49
USP6P35125 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.72□□□□□ -1.49
USP6P35125 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC5.72□□□□□ -1.49
USP6P35125 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.72□□□□□ -1.49
USP6P35125 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP6P35125 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.72□□□□□ -1.49
USP6P35125 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.72□□□□□ -1.49
USP6P35125 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC5.72□□□□□ -1.49
USP6P35125 AC027455.1-201ENST00000574104 594 ntBASIC5.72□□□□□ -1.49
USP6P35125 OCLM-201ENST00000574641 884 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
USP6P35125 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.72□□□□□ -1.49
USP6P35125 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.72□□□□□ -1.49
USP6P35125 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
USP6P35125 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.72□□□□□ -1.49
USP6P35125 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP6P35125 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.72□□□□□ -1.49
USP6P35125 AL133268.1-201ENST00000405676 1401 ntBASIC5.72□□□□□ -1.49
USP6P35125 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.72□□□□□ -1.49
USP6P35125 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.72□□□□□ -1.49
USP6P35125 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
USP6P35125 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
USP6P35125 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
USP6P35125 USP9YP4-201ENST00000424401 1745 ntBASIC5.71□□□□□ -1.49
USP6P35125 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
USP6P35125 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.71□□□□□ -1.5
USP6P35125 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.71□□□□□ -1.5
USP6P35125 CGA-201ENST00000369582 729 ntTSL 5 BASIC5.71□□□□□ -1.5
USP6P35125 OR2B3-201ENST00000377173 1106 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
USP6P35125 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP6P35125 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.71□□□□□ -1.5
USP6P35125 AL445433.1-201ENST00000457507 257 ntBASIC5.71□□□□□ -1.5
USP6P35125 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.71□□□□□ -1.5
USP6P35125 AC091564.1-201ENST00000464563 479 ntBASIC5.71□□□□□ -1.5
USP6P35125 RPS29P19-201ENST00000479709 171 ntBASIC5.71□□□□□ -1.5
USP6P35125 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.71□□□□□ -1.5
USP6P35125 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.71□□□□□ -1.5
USP6P35125 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC5.71□□□□□ -1.5
USP6P35125 ADAM3B-201ENST00000569937 840 ntBASIC5.71□□□□□ -1.5
USP6P35125 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC5.71□□□□□ -1.5
USP6P35125 AC008739.3-201ENST00000603262 127 ntBASIC5.71□□□□□ -1.5
USP6P35125 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
USP6P35125 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
USP6P35125 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.71□□□□□ -1.5
USP6P35125 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
USP6P35125 AC106871.1-201ENST00000568324 3102 ntBASIC5.71□□□□□ -1.5
USP6P35125 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.71□□□□□ -1.5
USP6P35125 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP6P35125 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP6P35125 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP6P35125 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC5.7□□□□□ -1.5
USP6P35125 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP6P35125 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP6P35125 AC000374.1-201ENST00000434698 1745 ntBASIC5.7□□□□□ -1.5
USP6P35125 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP6P35125 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.7□□□□□ -1.5
USP6P35125 TCP11X1-202ENST00000622971 1372 ntBASIC5.7□□□□□ -1.5
USP6P35125 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.7□□□□□ -1.5
USP6P35125 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP6P35125 MIR1179-201ENST00000408703 91 ntBASIC5.7□□□□□ -1.5
USP6P35125 AC018644.1-201ENST00000429934 551 ntBASIC5.7□□□□□ -1.5
USP6P35125 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC5.7□□□□□ -1.5
USP6P35125 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC5.7□□□□□ -1.5
USP6P35125 AC090151.1-201ENST00000520784 730 ntBASIC5.7□□□□□ -1.5
USP6P35125 OR7E10P-201ENST00000526420 991 ntBASIC5.7□□□□□ -1.5
USP6P35125 MIR3944-201ENST00000581277 108 ntBASIC5.7□□□□□ -1.5
USP6P35125 AL137246.1-201ENST00000607072 977 ntBASIC5.7□□□□□ -1.5
USP6P35125 MIR6500-201ENST00000622700 86 ntBASIC5.7□□□□□ -1.5
USP6P35125 AC012442.3-202ENST00000636742 206 ntBASIC5.7□□□□□ -1.5
USP6P35125 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
USP6P35125 SUPT16HP1-201ENST00000537175 3133 ntBASIC5.7□□□□□ -1.5
USP6P35125 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
USP6P35125 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP6P35125 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
USP6P35125 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP6P35125 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
USP6P35125 RNA5SP124-201ENST00000362739 110 ntBASIC5.69□□□□□ -1.5
USP6P35125 SNORD66.1-201ENST00000391230 76 ntBASIC5.69□□□□□ -1.5
USP6P35125 AL607077.1-201ENST00000401718 499 ntBASIC5.69□□□□□ -1.5
USP6P35125 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC5.69□□□□□ -1.5
USP6P35125 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms