Protein–RNA interactions for Protein: P33076

CIITA, MHC class II transactivator, humanhuman

Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CIITAP33076 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
CIITAP33076 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CIITAP33076 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CIITAP33076 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CIITAP33076 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC5.43□□□□□ -1.54
CIITAP33076 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.42□□□□□ -1.54
CIITAP33076 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC5.42□□□□□ -1.54
CIITAP33076 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 AC008549.2-201ENST00000333482 706 ntBASIC5.42□□□□□ -1.54
CIITAP33076 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 U3.35-201ENST00000408405 208 ntBASIC5.42□□□□□ -1.54
CIITAP33076 RPL26P37-201ENST00000411983 438 ntBASIC5.42□□□□□ -1.54
CIITAP33076 FO393414.1-201ENST00000428697 1184 ntBASIC5.42□□□□□ -1.54
CIITAP33076 BX119904.1-201ENST00000432026 348 ntBASIC5.42□□□□□ -1.54
CIITAP33076 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.42□□□□□ -1.54
CIITAP33076 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.42□□□□□ -1.54
CIITAP33076 AL157827.1-201ENST00000447622 132 ntBASIC5.42□□□□□ -1.54
CIITAP33076 AC022431.1-201ENST00000450941 438 ntBASIC5.42□□□□□ -1.54
CIITAP33076 CYCSP20-201ENST00000473154 315 ntBASIC5.42□□□□□ -1.54
CIITAP33076 RPL5P22-201ENST00000480199 884 ntBASIC5.42□□□□□ -1.54
CIITAP33076 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.42□□□□□ -1.54
CIITAP33076 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 AC023424.1-201ENST00000496058 459 ntBASIC5.42□□□□□ -1.54
CIITAP33076 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.42□□□□□ -1.54
CIITAP33076 AC091868.1-201ENST00000508746 304 ntBASIC5.42□□□□□ -1.54
CIITAP33076 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 RNU1-6P-201ENST00000516290 144 ntBASIC5.42□□□□□ -1.54
CIITAP33076 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.42□□□□□ -1.54
CIITAP33076 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC5.42□□□□□ -1.54
CIITAP33076 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.42□□□□□ -1.54
CIITAP33076 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC5.42□□□□□ -1.54
CIITAP33076 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.42□□□□□ -1.54
CIITAP33076 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.42□□□□□ -1.54
CIITAP33076 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC5.42□□□□□ -1.54
CIITAP33076 AGGF1P5-201ENST00000567900 919 ntBASIC5.42□□□□□ -1.54
CIITAP33076 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.42□□□□□ -1.54
CIITAP33076 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.42□□□□□ -1.54
CIITAP33076 AC008507.2-201ENST00000588402 1176 ntBASIC5.42□□□□□ -1.54
CIITAP33076 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.42□□□□□ -1.54
CIITAP33076 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.42□□□□□ -1.54
CIITAP33076 AP001160.4-201ENST00000596971 382 ntBASIC5.42□□□□□ -1.54
CIITAP33076 AC079880.2-201ENST00000603790 1213 ntBASIC5.42□□□□□ -1.54
CIITAP33076 MIR6780A-201ENST00000615089 68 ntBASIC5.42□□□□□ -1.54
CIITAP33076 RPL23AP61-201ENST00000623642 466 ntBASIC5.42□□□□□ -1.54
CIITAP33076 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.42□□□□□ -1.54
CIITAP33076 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 DDX18P5-201ENST00000534547 1306 ntBASIC5.42□□□□□ -1.54
CIITAP33076 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.42□□□□□ -1.54
CIITAP33076 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 AL034370.1-201ENST00000397254 1590 ntBASIC5.42□□□□□ -1.54
CIITAP33076 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CIITAP33076 DHX9P1-201ENST00000436565 3076 ntBASIC5.42□□□□□ -1.54
CIITAP33076 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.41□□□□□ -1.54
CIITAP33076 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 RNU6-354P-201ENST00000383862 107 ntBASIC5.41□□□□□ -1.54
CIITAP33076 RNU6-610P-201ENST00000384264 107 ntBASIC5.41□□□□□ -1.54
CIITAP33076 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 AL590762.2-201ENST00000395798 571 ntBASIC5.41□□□□□ -1.54
CIITAP33076 ARL4AP5-201ENST00000404372 599 ntBASIC5.41□□□□□ -1.54
CIITAP33076 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC5.41□□□□□ -1.54
CIITAP33076 SLC9B1P4-201ENST00000421957 1288 ntBASIC5.41□□□□□ -1.54
CIITAP33076 RGS17P1-201ENST00000423358 553 ntBASIC5.41□□□□□ -1.54
CIITAP33076 OR5M12P-201ENST00000423388 929 ntBASIC5.41□□□□□ -1.54
CIITAP33076 VN1R42P-201ENST00000424651 344 ntBASIC5.41□□□□□ -1.54
CIITAP33076 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC5.41□□□□□ -1.54
CIITAP33076 AC006994.1-201ENST00000438212 839 ntBASIC5.41□□□□□ -1.54
CIITAP33076 MTCYBP12-201ENST00000440559 1134 ntBASIC5.41□□□□□ -1.54
CIITAP33076 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.41□□□□□ -1.54
CIITAP33076 Z80107.2-201ENST00000445127 392 ntBASIC5.41□□□□□ -1.54
CIITAP33076 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.41□□□□□ -1.54
CIITAP33076 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 AL009048.1-201ENST00000450437 298 ntBASIC5.41□□□□□ -1.54
CIITAP33076 DUXAP8-207ENST00000456786 622 ntBASIC5.41□□□□□ -1.54
CIITAP33076 SETP6-201ENST00000479329 568 ntBASIC5.41□□□□□ -1.54
CIITAP33076 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.41□□□□□ -1.54
CIITAP33076 COX6B1P2-201ENST00000489624 230 ntBASIC5.41□□□□□ -1.54
CIITAP33076 HMGB1P38-201ENST00000490557 577 ntBASIC5.41□□□□□ -1.54
CIITAP33076 PPM1AP1-201ENST00000502740 1135 ntBASIC5.41□□□□□ -1.54
CIITAP33076 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC5.41□□□□□ -1.54
CIITAP33076 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 BTG4P1-201ENST00000510421 183 ntBASIC5.41□□□□□ -1.54
CIITAP33076 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.41□□□□□ -1.54
CIITAP33076 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 RPS27AP18-201ENST00000515536 459 ntBASIC5.41□□□□□ -1.54
CIITAP33076 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
CIITAP33076 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.41□□□□□ -1.54
CIITAP33076 AC139103.1-201ENST00000534696 1030 ntBASIC5.41□□□□□ -1.54
CIITAP33076 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC5.41□□□□□ -1.54
CIITAP33076 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.41□□□□□ -1.54
CIITAP33076 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms