Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC8.13□□□□□ -1.11
PTPREP23469 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPREP23469 AL359704.2-201ENST00000604335 521 ntBASIC8.13□□□□□ -1.11
PTPREP23469 ATP1B3P1-201ENST00000605365 821 ntBASIC8.13□□□□□ -1.11
PTPREP23469 LRMDA-216ENST00000611306 393 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
PTPREP23469 AC007485.1-201ENST00000616755 206 ntBASIC8.13□□□□□ -1.11
PTPREP23469 Six3os1_2.1-201ENST00000616963 217 ntBASIC8.13□□□□□ -1.11
PTPREP23469 TEX41-254ENST00000626394 423 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPREP23469 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC8.13□□□□□ -1.11
PTPREP23469 GCNT2-218ENST00000640968 939 ntTSL 5 BASIC8.13□□□□□ -1.11
PTPREP23469 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 CDH18-205ENST00000506372 2432 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 MTND5P28-201ENST00000438005 1594 ntBASIC8.13□□□□□ -1.11
PTPREP23469 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 AL049697.1-201ENST00000507897 2301 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
PTPREP23469 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 MTURN-202ENST00000324489 5605 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 MKI67P1-201ENST00000604297 1460 ntBASIC8.13□□□□□ -1.11
PTPREP23469 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
PTPREP23469 AC093297.3-201ENST00000607056 2517 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC8.12□□□□□ -1.11
PTPREP23469 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
PTPREP23469 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 LAMA2-205ENST00000617695 9678 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 LAMA2-206ENST00000618192 9687 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 RBBP4-202ENST00000373493 7943 ntAPPRIS P3 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 ATP2B4-204ENST00000367218 8918 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 AL355306.2-202ENST00000634380 2281 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC8.12□□□□□ -1.11
PTPREP23469 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 Y_RNA.153-201ENST00000363615 91 ntBASIC8.12□□□□□ -1.11
PTPREP23469 RNU6-1188P-201ENST00000363795 107 ntBASIC8.12□□□□□ -1.11
PTPREP23469 SNORA20.2-201ENST00000383922 131 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AL590762.1-201ENST00000391782 432 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AC026310.1-201ENST00000396004 378 ntBASIC8.12□□□□□ -1.11
PTPREP23469 ALDH7A1P4-201ENST00000412255 178 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AP000534.2-201ENST00000412729 568 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AL136133.1-201ENST00000413694 376 ntBASIC8.12□□□□□ -1.11
PTPREP23469 ATP6V1G1P7-201ENST00000415853 349 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPREP23469 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC8.12□□□□□ -1.11
PTPREP23469 AC018865.2-201ENST00000423631 129 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AC093151.1-201ENST00000427711 313 ntBASIC8.12□□□□□ -1.11
PTPREP23469 NRBF2P3-201ENST00000432731 865 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AC092809.1-201ENST00000441469 474 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AC104651.2-201ENST00000447549 528 ntBASIC8.12□□□□□ -1.11
PTPREP23469 PCNPP5-201ENST00000452246 481 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPREP23469 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPREP23469 IGLC4-201ENST00000517690 248 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AC022616.6-201ENST00000520479 119 ntBASIC8.12□□□□□ -1.11
PTPREP23469 ASCL3-201ENST00000531618 633 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PTPREP23469 AC068305.2-201ENST00000550567 1205 ntBASIC8.12□□□□□ -1.11
PTPREP23469 MIR378C-201ENST00000578683 81 ntBASIC8.12□□□□□ -1.11
PTPREP23469 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PTPREP23469 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPREP23469 AC011447.2-201ENST00000592921 283 ntBASIC8.12□□□□□ -1.11
PTPREP23469 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 uc_338.11-201ENST00000619132 160 ntBASIC8.12□□□□□ -1.11
PTPREP23469 MRPL57P3-201ENST00000619218 176 ntBASIC8.12□□□□□ -1.11
PTPREP23469 MIR6823-201ENST00000622118 61 ntBASIC8.12□□□□□ -1.11
PTPREP23469 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC8.12□□□□□ -1.11
PTPREP23469 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC8.12□□□□□ -1.11
PTPREP23469 OR2A42-202ENST00000641810 4946 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
PTPREP23469 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 ZNF763-202ENST00000358987 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC8.12□□□□□ -1.11
PTPREP23469 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 GUCY1B2-203ENST00000493639 2871 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
PTPREP23469 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
PTPREP23469 CEP290-207ENST00000552810 7948 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC8.11□□□□□ -1.11
PTPREP23469 FGFR2-213ENST00000369061 3803 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 SPATA2P1-201ENST00000431223 2055 ntBASIC8.11□□□□□ -1.11
PTPREP23469 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
PTPREP23469 RNA5SP382-201ENST00000363355 112 ntBASIC8.11□□□□□ -1.11
PTPREP23469 RN7SKP187-201ENST00000365536 330 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms