Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.62□□□□□ -1.35
NFKB1P19838 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC6.62□□□□□ -1.35
NFKB1P19838 AL163952.1-202ENST00000569625 600 ntBASIC6.62□□□□□ -1.35
NFKB1P19838 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC6.62□□□□□ -1.35
NFKB1P19838 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.62□□□□□ -1.35
NFKB1P19838 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC6.62□□□□□ -1.35
NFKB1P19838 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC6.62□□□□□ -1.35
NFKB1P19838 AC090527.3-201ENST00000619041 548 ntBASIC6.62□□□□□ -1.35
NFKB1P19838 AC231657.1-201ENST00000624313 397 ntBASIC6.62□□□□□ -1.35
NFKB1P19838 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.62□□□□□ -1.35
NFKB1P19838 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.62□□□□□ -1.35
NFKB1P19838 CNOT4-205ENST00000423368 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NFKB1P19838 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NFKB1P19838 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
NFKB1P19838 LRRC37A12P-201ENST00000454917 1801 ntBASIC6.62□□□□□ -1.35
NFKB1P19838 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
NFKB1P19838 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
NFKB1P19838 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.62□□□□□ -1.35
NFKB1P19838 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.61□□□□□ -1.35
NFKB1P19838 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC6.61□□□□□ -1.35
NFKB1P19838 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NFKB1P19838 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.61□□□□□ -1.35
NFKB1P19838 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC6.61□□□□□ -1.35
NFKB1P19838 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NFKB1P19838 RNU6-1322P-201ENST00000364309 107 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 IARS-201ENST00000375627 697 ntTSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 AC211486.3-201ENST00000412694 621 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.61□□□□□ -1.35
NFKB1P19838 AL445669.1-201ENST00000426743 755 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 HMGB3P12-201ENST00000438745 556 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 UBE2V1P5-201ENST00000440070 405 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 RPS19P6-201ENST00000441327 433 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC6.61□□□□□ -1.35
NFKB1P19838 AC132479.1-201ENST00000449160 144 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC6.61□□□□□ -1.35
NFKB1P19838 AC103563.5-201ENST00000455643 364 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 RPL7P48-201ENST00000461513 746 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC6.61□□□□□ -1.35
NFKB1P19838 RN7SL267P-201ENST00000485107 261 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 RPL36AP51-201ENST00000487216 318 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 AC022206.1-201ENST00000495947 347 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC6.61□□□□□ -1.35
NFKB1P19838 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC6.61□□□□□ -1.35
NFKB1P19838 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NFKB1P19838 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC6.61□□□□□ -1.35
NFKB1P19838 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC6.61□□□□□ -1.35
NFKB1P19838 NMNAT1P1-201ENST00000554095 876 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 AC011497.2-201ENST00000600255 639 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 AC007687.1-201ENST00000602704 304 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 AC097468.3-201ENST00000607956 456 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 AC009268.2-201ENST00000621925 457 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 MIR1302-1-201ENST00000637932 143 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 AC046144.1-201ENST00000478559 1853 ntBASIC6.61□□□□□ -1.35
NFKB1P19838 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.61□□□□□ -1.35
NFKB1P19838 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NFKB1P19838 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
NFKB1P19838 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
NFKB1P19838 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NFKB1P19838 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
NFKB1P19838 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.61□□□□□ -1.35
NFKB1P19838 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
NFKB1P19838 PRICKLE1-202ENST00000445766 4075 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC010928.1-201ENST00000592477 1447 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 EIF1-203ENST00000469257 2330 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 STAG3L4-201ENST00000352103 530 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 Y_RNA.67-201ENST00000362870 100 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NFKB1P19838 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 MRPS6P2-201ENST00000381143 370 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 MIR606-201ENST00000384851 96 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.6□□□□□ -1.35
NFKB1P19838 AL359704.1-201ENST00000411586 781 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC6.6□□□□□ -1.35
NFKB1P19838 AL353193.1-201ENST00000421444 268 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AL589794.1-201ENST00000424971 390 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC133104.1-201ENST00000429100 218 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 NANOGP6-201ENST00000429190 847 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AL365400.1-201ENST00000431854 640 ntBASIC6.6□□□□□ -1.35
NFKB1P19838 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC6.6□□□□□ -1.35
NFKB1P19838 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms