Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 AC012254.3-201ENST00000591183 2117 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AC025809.2-201ENST00000625085 1802 ntBASIC5.69□□□□□ -1.5
ATF4P18848 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.69□□□□□ -1.5
ATF4P18848 AC007012.2-201ENST00000623206 1676 ntBASIC5.69□□□□□ -1.5
ATF4P18848 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.69□□□□□ -1.5
ATF4P18848 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 Y_RNA.9-201ENST00000362354 101 ntBASIC5.69□□□□□ -1.5
ATF4P18848 RNU6-97P-201ENST00000363387 104 ntBASIC5.69□□□□□ -1.5
ATF4P18848 SNORA30B-201ENST00000365319 129 ntBASIC5.69□□□□□ -1.5
ATF4P18848 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATF4P18848 RNA5SP297-201ENST00000391029 113 ntBASIC5.69□□□□□ -1.5
ATF4P18848 OR7E101P-201ENST00000400428 513 ntBASIC5.69□□□□□ -1.5
ATF4P18848 RNU2-15P-201ENST00000410692 191 ntBASIC5.69□□□□□ -1.5
ATF4P18848 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF4P18848 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 AL353777.1-201ENST00000425552 326 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AC009495.3-201ENST00000425688 779 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF4P18848 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.69□□□□□ -1.5
ATF4P18848 AC127537.2-201ENST00000439258 465 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC5.69□□□□□ -1.5
ATF4P18848 OR7E125P-201ENST00000443450 846 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF4P18848 AC003071.1-201ENST00000451219 789 ntBASIC5.69□□□□□ -1.5
ATF4P18848 RGS5-217ENST00000451759 835 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF4P18848 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF4P18848 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.69□□□□□ -1.5
ATF4P18848 RN7SL552P-201ENST00000462094 276 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AL672167.3-201ENST00000465951 960 ntBASIC5.69□□□□□ -1.5
ATF4P18848 RPL31P58-201ENST00000469001 379 ntBASIC5.69□□□□□ -1.5
ATF4P18848 RN7SL414P-201ENST00000469545 294 ntBASIC5.69□□□□□ -1.5
ATF4P18848 RN7SL338P-201ENST00000481467 293 ntBASIC5.69□□□□□ -1.5
ATF4P18848 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF4P18848 RPS4XP23-201ENST00000487801 237 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AC012170.1-201ENST00000495139 359 ntBASIC5.69□□□□□ -1.5
ATF4P18848 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC5.69□□□□□ -1.5
ATF4P18848 HMGB1P29-201ENST00000505659 499 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AC097486.1-201ENST00000515331 210 ntBASIC5.69□□□□□ -1.5
ATF4P18848 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC5.69□□□□□ -1.5
ATF4P18848 AC022616.6-201ENST00000520479 119 ntBASIC5.69□□□□□ -1.5
ATF4P18848 RAB30-205ENST00000527633 792 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC5.69□□□□□ -1.5
ATF4P18848 SETP2-201ENST00000553886 926 ntBASIC5.69□□□□□ -1.5
ATF4P18848 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.69□□□□□ -1.5
ATF4P18848 AC007956.1-201ENST00000555623 542 ntBASIC5.69□□□□□ -1.5
ATF4P18848 MEG8-218ENST00000556720 456 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF4P18848 AC092325.1-201ENST00000566449 554 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AP003115.1-201ENST00000569849 463 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC5.69□□□□□ -1.5
ATF4P18848 MIR4786-201ENST00000583954 80 ntBASIC5.69□□□□□ -1.5
ATF4P18848 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC5.69□□□□□ -1.5
ATF4P18848 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF4P18848 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF4P18848 YWHAQP7-201ENST00000603536 658 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.69□□□□□ -1.5
ATF4P18848 PART1_3.1-201ENST00000619680 131 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AC244196.1-201ENST00000620569 409 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
ATF4P18848 AL157786.1-207ENST00000627771 695 ntBASIC5.69□□□□□ -1.5
ATF4P18848 AC233280.20-201ENST00000637412 416 ntBASIC5.69□□□□□ -1.5
ATF4P18848 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC5.69□□□□□ -1.5
ATF4P18848 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
ATF4P18848 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.69□□□□□ -1.5
ATF4P18848 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.69□□□□□ -1.5
ATF4P18848 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
ATF4P18848 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC5.68□□□□□ -1.5
ATF4P18848 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 CASC23-201ENST00000534076 1563 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 AC091046.3-201ENST00000631455 1574 ntBASIC5.68□□□□□ -1.5
ATF4P18848 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ATF4P18848 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 USP46-202ENST00000451218 4622 ntTSL 5 BASIC5.68□□□□□ -1.5
ATF4P18848 ADAM7-203ENST00000441335 1417 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 WNK1-220ENST00000574564 1401 ntBASIC5.68□□□□□ -1.5
ATF4P18848 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATF4P18848 AC008033.1-201ENST00000216407 1162 ntBASIC5.68□□□□□ -1.5
ATF4P18848 U3.1-201ENST00000362500 215 ntBASIC5.68□□□□□ -1.5
ATF4P18848 RNA5SP258-201ENST00000362750 119 ntBASIC5.68□□□□□ -1.5
ATF4P18848 RNU6-1207P-201ENST00000384343 107 ntBASIC5.68□□□□□ -1.5
ATF4P18848 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ATF4P18848 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
ATF4P18848 AL133482.1-201ENST00000415988 498 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC5.68□□□□□ -1.5
ATF4P18848 AL589872.1-201ENST00000426602 288 ntBASIC5.68□□□□□ -1.5
ATF4P18848 RNF11P2-201ENST00000427702 440 ntBASIC5.68□□□□□ -1.5
ATF4P18848 AL645936.2-201ENST00000430565 928 ntBASIC5.68□□□□□ -1.5
ATF4P18848 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC5.68□□□□□ -1.5
ATF4P18848 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms